RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 CD247P20963 164 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 C5AR1P21730 350 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 RHAGQ02094 409 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 C19orf18Q8NEA5 215 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 IFT80Q9P2H3 777 aaPredicted RBP11.87□□□□□ -0.51
NEK1-201ENST00000439128 IKZF3Q9UKT9 509 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 GNEQ9Y223 722 aaKnown RBP11.87□□□□□ -0.51
NEK1-201ENST00000439128 STX11O75558 287 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 ALOX5P09917 674 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 COL6A2P12110 1019 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 SLC1A2P43004 574 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 ELAVL3Q14576 367 aaKnown RBP11.87□□□□□ -0.51
NEK1-201ENST00000439128 GFOD2Q3B7J2 385 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 SLC30A6Q6NXT4 461 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 Q6ZVL8 140 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 ARCQ7LC44 396 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 ULK2Q8IYT8 1036 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 ANKZF1Q9H8Y5 726 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 FBRSL1Q9HCM7 1045 aaKnown RBP11.87□□□□□ -0.51
NEK1-201ENST00000439128 RARRES3Q9UL19 164 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 IQCMA0A1B0GVH7 501 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 CLOCKO15516 846 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 ARSAP15289 507 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 TOP3AQ13472 1001 aaPredicted RBP11.87□□□□□ -0.51
NEK1-201ENST00000439128 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.87□□□□□ -0.51
NEK1-201ENST00000439128 DDI2Q5TDH0 399 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 CLEC6AQ6EIG7 209 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 KIAA0408Q6ZU52 694 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 MYLIPQ8WY64 445 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 CPT1BQ92523 772 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 SPAG4Q9NPE6 437 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 PRDM8Q9NQV8 689 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 GDE1Q9NZC3 331 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 IGSF9Q9P2J2 1179 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 PPM1HQ9ULR3 514 aa11.87□□□□□ -0.51
NEK1-201ENST00000439128 PCDHGA12O60330 932 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 MPSTP25325 297 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 GRK6P43250 576 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 KHKP50053 298 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 RAB8AP61006 207 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 PSME3P61289 254 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 RALGPS1Q5JS13 557 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 SLC25A24Q6NUK1 477 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 DPY19L3Q6ZPD9 716 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 RASGEF1AQ8N9B8 481 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 OR2AJ1Q8NGZ0 328 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 FAM110BQ8TC76 370 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 TMEM40Q8WWA1 233 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 Q96MT0 163 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 FEM1AQ9BSK4 669 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 C9orf16Q9BUW7 83 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 PNPOQ9NVS9 261 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 PTGFRNQ9P2B2 879 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 OGDHLQ9ULD0 1010 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 FBLP22087 321 aaKnown RBP11.86□□□□□ -0.51
NEK1-201ENST00000439128 GDI2P50395 445 aaKnown RBP11.86□□□□□ -0.51
NEK1-201ENST00000439128 OASLQ15646 514 aaKnown RBP11.86□□□□□ -0.51
NEK1-201ENST00000439128 FAM214AQ32MH5 1076 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 NCBP2-AS2Q69YL0 99 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 SPESP1Q6UW49 350 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 PEG10Q86TG7 708 aaKnown RBP11.86□□□□□ -0.51
NEK1-201ENST00000439128 SLC22A15Q8IZD6 547 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 SLC13A3Q8WWT9 602 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 ZBED6CLQ96FA7 236 aaPredicted RBP11.86□□□□□ -0.51
NEK1-201ENST00000439128 SLC47A1Q96FL8 570 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 ZNF641Q96N77 438 aaPredicted RBP11.86□□□□□ -0.51
NEK1-201ENST00000439128 BTBD10Q9BSF8 475 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 RBCK1Q9BYM8 510 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 HEBP1Q9NRV9 189 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 PLK4O00444 970 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 BIRC5O15392 142 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 CDC40O60508 579 aaKnown RBP eCLIP11.86□□□□□ -0.51
NEK1-201ENST00000439128 CST1P01037 141 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 COX4I1P13073 169 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 TMEM115Q12893 351 aaPredicted RBP11.86□□□□□ -0.51
NEK1-201ENST00000439128 CAMK1Q14012 370 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 OR8H2Q8N162 312 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 SLC39A11Q8N1S5 342 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 YIPF4Q9BSR8 244 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 CPEB1Q9BZB8 566 aaKnown RBP11.86□□□□□ -0.51
NEK1-201ENST00000439128 XKR8Q9H6D3 395 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 AKAP12Q02952 1782 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 OR5K4A6NMS3 321 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 TP73O15350 636 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 UBOX5O94941 541 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 CXCR1P25024 350 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 SHMT2P34897 504 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 RANBP1P43487 201 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 CDKN1CP49918 316 aaPredicted RBP11.86□□□□□ -0.51
NEK1-201ENST00000439128 DYNC1I2Q13409 638 aaKnown RBP11.86□□□□□ -0.51
NEK1-201ENST00000439128 ARHGAP36Q6ZRI8 547 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 CLNKQ7Z7G1 428 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 ATXN2LQ8WWM7 1075 aaKnown RBP11.86□□□□□ -0.51
NEK1-201ENST00000439128 FKBP6O75344 327 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 RBMXL2O75526 392 aaKnown RBP11.86□□□□□ -0.51
NEK1-201ENST00000439128 MFN2O95140 757 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 UROSP10746 265 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 POLR2JP52435 117 aaKnown RBP11.86□□□□□ -0.51
NEK1-201ENST00000439128 SHHQ15465 462 aa11.86□□□□□ -0.51
NEK1-201ENST00000439128 ZNF648Q5T619 568 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms