RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 LETM2Q2VYF4 491 aa3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 CST9LP1Q5W188 147 aa3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 CHST3Q7LGC8 479 aa3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 IQCHQ86VS3 1027 aa3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 CRYBG2Q8N1P7 616 aa3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 TDRD5Q8NAT2 981 aaKnown RBP3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 OR2T12Q8NG77 320 aa3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 LRRC8CQ8TDW0 803 aa3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 RNF128Q8TEB7 428 aa3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 TEKT4Q8WW24 435 aa3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 HDAC11Q96DB2 347 aa3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 SFXN2Q96NB2 322 aa3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 BAG1Q99933 345 aaPredicted RBP3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 GPR88Q9GZN0 384 aa3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 GOLPH3LQ9H4A5 285 aa3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 ACAD8Q9UKU7 415 aa3.53□□□□□ -1.84
LSM1P1-201ENST00000438629 RPGRIP1LQ68CZ1 1315 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 A0A0B4J293 547 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 A0A0G2JLW4 131 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 HYKKA2RU49 373 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 IFITM10A6NMD0 228 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 UBE2CO00762 179 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 MEIS2O14770 477 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 CLIC2O15247 247 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 PCDH7O60245 1069 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 DKC1O60832 514 aaKnown RBP eCLIP3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 C22orf31O95567 290 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 FYNP06241 537 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 INHBAP08476 426 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 DNASE1P24855 282 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 EPHA2P29317 976 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 THOP1P52888 689 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 PRKCZQ05513 592 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 PSMD6Q15008 389 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 TAF13Q15543 124 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 CDC37Q16543 378 aaPredicted RBP3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 TECRLQ5HYJ1 363 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 SPECC1Q5M775 1068 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 C6orf163Q5TEZ5 329 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 SFMBT2Q5VUG0 894 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 RPUSD3Q6P087 351 aaKnown RBP3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 TMPRSS11FQ6ZWK6 438 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 GET4Q7L5D6 327 aaPredicted RBP3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 DET1Q7L5Y6 550 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 CCDC186Q7Z3E2 898 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 SMIM29Q86T20 159 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 NUDT13Q86X67 352 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 CREBRFQ8IUR6 639 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 CNBD1Q8NA66 436 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 OR5M8Q8NGP6 311 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 GRAPLQ8TC17 118 aaPredicted RBP3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 TM9SF4Q92544 642 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 NXNL1Q96CM4 212 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 RMDN1Q96DB5 314 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 ZNF354BQ96LW1 612 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 NODALQ96S42 347 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 MYADMQ96S97 322 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 OLFM1Q99784 485 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 PANK2Q9BZ23 570 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 VN1R1Q9GZP7 353 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 MIS12Q9H081 205 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 BICC1Q9H694 974 aaKnown RBP3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 ERVMER34-1Q9H9K5 563 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 PTTG2Q9NZH5 202 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 NFKBIL1Q9UBC1 381 aaPredicted RBP3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 CCL27Q9Y4X3 112 aa3.52□□□□□ -1.85
LSM1P1-201ENST00000438629 CNTNAP2Q9UHC6 1331 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 GREB1LQ9C091 1923 aaPredicted RBP3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 A0A1W2PN81 502 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 OR6C76A6NM76 312 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 E9PI62 339 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 SYNCRIPO60506 623 aaKnown RBP3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 PRKRAO75569 313 aaKnown RBP3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 SLC22A3O75751 556 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 PSMD10O75832 226 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 PIGNO95427 931 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 GGPS1O95749 300 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 CCDC175P0C221 793 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 IGHV4-38-2P0DP08 117 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 LIFP15018 202 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 ERCC2P18074 760 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 NR1D1P20393 614 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 CHRNA7P36544 502 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 CDKN1AP38936 164 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 DCTP40126 519 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 PDX1P52945 283 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 LIMK1P53667 647 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 TPD52P55327 224 aaPredicted RBP3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 CX3CL1P78423 397 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 RALGDSQ12967 914 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 RBPMS2Q6ZRY4 209 aaKnown RBP3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 PLPPR4Q7Z2D5 763 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 STPG4Q8N801 248 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 KLHDC9Q8NEP7 349 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 DNASE2BQ8WZ79 361 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 DHX58Q96C10 678 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 SPDL1Q96EA4 605 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 ALG14Q96F25 216 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 NSL1Q96IY1 281 aa3.51□□□□□ -1.85
LSM1P1-201ENST00000438629 TSPAN18Q96SJ8 248 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms