RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 MCCC1Q96RQ3 725 aaPredicted RBP10.58□□□□□ -0.72
RTN4-211ENST00000438462 C7orf25Q9BPX7 421 aa10.58□□□□□ -0.72
RTN4-211ENST00000438462 IRAK4Q9NWZ3 460 aa10.58□□□□□ -0.72
RTN4-211ENST00000438462 TEKT2Q9UIF3 430 aa10.58□□□□□ -0.72
RTN4-211ENST00000438462 FAM215AQ9Y5M1 114 aa10.58□□□□□ -0.72
RTN4-211ENST00000438462 DSCAMO60469 2012 aa10.58□□□□□ -0.72
RTN4-211ENST00000438462 DNAJC13O75165 2243 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 VWFP04275 2813 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 WASH4PA8MWX3 477 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 KMOO15229 486 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 CALUO43852 315 aaPredicted RBP10.57□□□□□ -0.72
RTN4-211ENST00000438462 PRMT3O60678 531 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 TFEBP19484 476 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 HLA-DPA1P20036 260 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 FPR1P21462 350 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 ACVR2AP27037 513 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 NEK4P51957 841 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 AP1S1P61966 158 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 SLC6A3Q01959 620 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 PTSQ03393 145 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 E2F4Q16254 413 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 MEA1Q16626 185 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 SLC5A12Q1EHB4 618 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 UNC5DQ6UXZ4 953 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 B3GNT6Q6ZMB0 384 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 ZNF397Q8NF99 534 aaPredicted RBP10.57□□□□□ -0.72
RTN4-211ENST00000438462 SLC20A1Q8WUM9 679 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 SMPDL3BQ92485 455 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 LRRC46Q96FV0 321 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 PITPNM3Q9BZ71 974 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 MAGEB5Q9BZ81 275 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 SHARPINQ9H0F6 387 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 FAM60AQ9NP50 221 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 PNPLA3Q9NST1 481 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 IMP3Q9NV31 184 aaKnown RBP10.57□□□□□ -0.72
RTN4-211ENST00000438462 B4GALT7Q9UBV7 327 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 PSMD13Q9UNM6 376 aa10.57□□□□□ -0.72
RTN4-211ENST00000438462 CFAP20Q9Y6A4 193 aaKnown RBP10.57□□□□□ -0.72
RTN4-211ENST00000438462 RAI1Q7Z5J4 1906 aaPredicted RBP10.56□□□□□ -0.72
RTN4-211ENST00000438462 IGHV1-45A0A0A0MS14 117 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 A0A1W2PQ67 120 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 CHUKO15111 745 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 SOCS5O75159 536 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 PALMO75781 387 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 MATN4O95460 622 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 ONECUT2O95948 504 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 PSMC2P35998 433 aaKnown RBP10.56□□□□□ -0.72
RTN4-211ENST00000438462 CD96P40200 585 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 CARSP49589 748 aaKnown RBP10.56□□□□□ -0.72
RTN4-211ENST00000438462 YBEYP58557 167 aaPredicted RBP10.56□□□□□ -0.72
RTN4-211ENST00000438462 KLC1Q07866 573 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 STK4Q13043 487 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 FASTKQ14296 549 aaKnown RBP10.56□□□□□ -0.72
RTN4-211ENST00000438462 ACKR1Q16570 336 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 SLC25A52Q3SY17 297 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 PARP15Q460N3 678 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 CMPK2Q5EBM0 449 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 FCRLBQ6BAA4 426 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 ARHGAP11AQ6P4F7 1023 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 ZNF547Q8IVP9 402 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 ARHGAP12Q8IWW6 846 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 PRSS58Q8IYP2 241 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 SMYD4Q8IYR2 804 aaPredicted RBP10.56□□□□□ -0.72
RTN4-211ENST00000438462 DEPDC4Q8N2C3 294 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 PPM1KQ8N3J5 372 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 LRRC17Q8N6Y2 441 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 RTL3Q8N8U3 475 aaKnown RBP10.56□□□□□ -0.72
RTN4-211ENST00000438462 OR5M9Q8NGP3 310 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 WDR24Q96S15 920 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 KCNK17Q96T54 332 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 C12orf65Q9H3J6 166 aaKnown RBP10.56□□□□□ -0.72
RTN4-211ENST00000438462 RIC8BQ9NVN3 520 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 TMEM160Q9NX00 188 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 SLC24A2Q9UI40 661 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 VPS9D1Q9Y2B5 631 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 COQ4Q9Y3A0 265 aa10.56□□□□□ -0.72
RTN4-211ENST00000438462 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.55□□□□□ -0.72
RTN4-211ENST00000438462 A0A1B0GX78 115 aa10.55□□□□□ -0.72
RTN4-211ENST00000438462 VSTM2BA6NLU5 285 aa10.55□□□□□ -0.72
RTN4-211ENST00000438462 ACTN4O43707 911 aaKnown RBP10.55□□□□□ -0.72
RTN4-211ENST00000438462 HS6ST1O60243 411 aa10.55□□□□□ -0.72
RTN4-211ENST00000438462 STX10O60499 249 aa10.55□□□□□ -0.72
RTN4-211ENST00000438462 PRAMEF11O60813 436 aa10.55□□□□□ -0.72
RTN4-211ENST00000438462 LETM1O95202 739 aaPredicted RBP10.55□□□□□ -0.72
RTN4-211ENST00000438462 SP1P08047 785 aa10.55□□□□□ -0.72
RTN4-211ENST00000438462 PIM1P11309 404 aaPredicted RBP10.55□□□□□ -0.72
RTN4-211ENST00000438462 MTHFD1P11586 935 aaKnown RBP10.55□□□□□ -0.72
RTN4-211ENST00000438462 PRDX3P30048 256 aaKnown RBP10.55□□□□□ -0.72
RTN4-211ENST00000438462 GABRA4P48169 554 aa10.55□□□□□ -0.72
RTN4-211ENST00000438462 STC1P52823 247 aa10.55□□□□□ -0.72
RTN4-211ENST00000438462 TRAF2Q12933 501 aa10.55□□□□□ -0.72
RTN4-211ENST00000438462 MESDQ14696 234 aa10.55□□□□□ -0.72
RTN4-211ENST00000438462 CLEC12BQ2HXU8 276 aa10.55□□□□□ -0.72
RTN4-211ENST00000438462 HENMT1Q5T8I9 393 aaKnown RBP10.55□□□□□ -0.72
RTN4-211ENST00000438462 TLDC1Q6P9B6 456 aa10.55□□□□□ -0.72
RTN4-211ENST00000438462 TTLL10Q6ZVT0 673 aa10.55□□□□□ -0.72
RTN4-211ENST00000438462 NLRP9Q7RTR0 991 aa10.55□□□□□ -0.72
RTN4-211ENST00000438462 ADGRG6Q86SQ4 1221 aa10.55□□□□□ -0.72
RTN4-211ENST00000438462 C1orf159Q96HA4 380 aa10.55□□□□□ -0.72
RTN4-211ENST00000438462 OLFM1Q99784 485 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms