RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 AXIN1O15169 862 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 HNRNPRO43390 633 aaKnown RBP9.29□□□□□ -0.92
CUX1-206ENST00000437600 SRCP12931 536 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 TYRP14679 529 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 IDO1P14902 403 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 VIPR2P41587 438 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 LAPTM5Q13571 262 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 GRM2Q14416 872 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 ZXDCQ2QGD7 858 aaPredicted RBP9.29□□□□□ -0.92
CUX1-206ENST00000437600 ATP13A5Q4VNC0 1218 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 MPPE1Q53F39 396 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 KRT80Q6KB66 452 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 TMEM214Q6NUQ4 689 aaKnown RBP9.29□□□□□ -0.92
CUX1-206ENST00000437600 C8orf82Q6P1X6 216 aaPredicted RBP9.29□□□□□ -0.92
CUX1-206ENST00000437600 EPHX4Q8IUS5 362 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 PHACTR4Q8IZ21 702 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 FAM86B1Q8N7N1 296 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 KCNJ9Q92806 393 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 TMEM125Q96AQ2 219 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 PBXIP1Q96AQ6 731 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 TIFAQ96CG3 184 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 TCF12Q99081 682 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 KCTD14Q9BQ13 255 aaPredicted RBP9.29□□□□□ -0.92
CUX1-206ENST00000437600 SARDHQ9UL12 918 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 DOCK8Q8NF50 2099 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 VILLO15195 856 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 HTRA2O43464 458 aaPredicted RBP9.29□□□□□ -0.92
CUX1-206ENST00000437600 B4GAT1O43505 415 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 FZD6O60353 706 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 FOXD2O60548 495 aaPredicted RBP9.29□□□□□ -0.92
CUX1-206ENST00000437600 ATP6V1G1O75348 118 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 STAMBPO95630 424 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 C8BP07358 591 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 CEBPBP17676 345 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 MAPK10P53779 464 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 INO80DQ53TQ3 878 aaPredicted RBP9.29□□□□□ -0.92
CUX1-206ENST00000437600 TCEAL5Q5H9L2 206 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 DPY19L3Q6ZPD9 716 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 HS3ST5Q8IZT8 346 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 TRIML2Q8N7C3 387 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 PEX13Q92968 403 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 HIC2Q96JB3 615 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 VPS50Q96JG6 964 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 ATG10Q9H0Y0 220 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 P2RY12Q9H244 342 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 IKZF5Q9H5V7 419 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 SLC6A13Q9NSD5 602 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 DUS2Q9NX74 493 aaKnown RBP9.29□□□□□ -0.92
CUX1-206ENST00000437600 KIAA1522Q9P206 1035 aaPredicted RBP9.29□□□□□ -0.92
CUX1-206ENST00000437600 PCDHA9Q9Y5H5 950 aa9.29□□□□□ -0.92
CUX1-206ENST00000437600 DFNA5O60443 496 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 SEC22BO75396 215 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 NFKBIAP25963 317 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 HMOX2P30519 316 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 CACNG1Q06432 222 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 COL9A2Q14055 689 aaPredicted RBP9.28□□□□□ -0.92
CUX1-206ENST00000437600 BOP1Q14137 746 aaKnown RBP9.28□□□□□ -0.92
CUX1-206ENST00000437600 LRRC66Q68CR7 880 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 TMEM215Q68D42 235 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 CYP20A1Q6UW02 462 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 SERPINA13PQ6UXR4 307 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 VRK3Q8IV63 474 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 EGLN2Q96KS0 407 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 THUMPD3Q9BV44 507 aaKnown RBP9.28□□□□□ -0.92
CUX1-206ENST00000437600 OLAHQ9NV23 265 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 AIG1Q9NVV5 245 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 SMOXQ9NWM0 555 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 VAPAQ9P0L0 249 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 RAB26Q9ULW5 256 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 RABL2BQ9UNT1 228 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 MYO10Q9HD67 2058 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 GLYATL1P3A0A0U1RQE8 302 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 DLGAP1O14490 977 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 EI24O14681 340 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 MLYCDO95822 493 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 PENKP01210 267 aaPredicted RBP9.28□□□□□ -0.92
CUX1-206ENST00000437600 TRBC1P01850 177 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 ESR1P03372 595 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 ZNF7P17097 686 aaPredicted RBP9.28□□□□□ -0.92
CUX1-206ENST00000437600 PTPN2P17706 415 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 DLX2Q07687 328 aaPredicted RBP9.28□□□□□ -0.92
CUX1-206ENST00000437600 FAM174BQ3ZCQ3 159 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 C10orf111Q8N326 155 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 ZNF786Q8N393 782 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 OR10A6Q8NH74 314 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 FIBINQ8TAL6 211 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 FIG4Q92562 907 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 MPP4Q96JB8 637 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 HOPXQ9BPY8 73 aaPredicted RBP9.28□□□□□ -0.92
CUX1-206ENST00000437600 Q9H521 79 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 WWOXQ9NZC7 414 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 SPATA7Q9P0W8 599 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 TMCO1Q9UM00 188 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 VPS4AQ9UN37 437 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 RWDD3Q9Y3V2 267 aa9.28□□□□□ -0.92
CUX1-206ENST00000437600 GON4LQ3T8J9 2241 aa9.27□□□□□ -0.92
CUX1-206ENST00000437600 OR2AG2A6NM03 316 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 TMX2-CTNND1H3BSU7 103 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 LHCGRP22888 699 aa9.27□□□□□ -0.93
CUX1-206ENST00000437600 ITPKAP23677 461 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms