RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 PDP2Q9P2J9 529 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 THEGQ9P2T0 379 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 MAN1B1Q9UKM7 699 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 ANGPTL3Q9Y5C1 460 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 LYVE1Q9Y5Y7 322 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 MPTX1A8MV57 137 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 SRRM5B3KS81 715 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 TO15178 435 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 NDUFS4O43181 175 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 EIF2S1P05198 315 aaKnown RBP3.03□□□□□ -1.92
PTPN4-205ENST00000433888 DUX4L4P0CJ87 422 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 ATP1A3P13637 1013 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 CYP2A7P20853 494 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 CA6P23280 308 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 OPRL1P41146 370 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 PPP2R2BQ00005 443 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 PAX8Q06710 450 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 G3BP1Q13283 466 aaKnown RBP eCLIP3.03□□□□□ -1.92
PTPN4-205ENST00000433888 WLSQ5T9L3 541 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 FAM180BQ6P0A1 224 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 ZNF584Q8IVC4 421 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 NME8Q8N427 588 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 FRMD1Q8N878 549 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 TEX19Q8NA77 164 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 C17orf47Q8NEP4 570 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 ETNPPLQ8TBG4 499 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 TBC1D16Q8TBP0 767 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 GAD1Q99259 594 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 PITPNM3Q9BZ71 974 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 VN1R1Q9GZP7 353 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 RRP7BPQ9NSQ0 103 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 ZNF701Q9NV72 531 aaPredicted RBP3.03□□□□□ -1.92
PTPN4-205ENST00000433888 PANK4Q9NVE7 773 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 RARRES3Q9UL19 164 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 CRYL1Q9Y2S2 319 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 RUSC2Q8N2Y8 1516 aa3.03□□□□□ -1.92
PTPN4-205ENST00000433888 COL16A1Q07092 1604 aaPredicted RBP3.02□□□□□ -1.93
PTPN4-205ENST00000433888 PRSS51A0A1B0GVH4 220 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 A6NLC8 198 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 KLLNB2CW77 178 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 IDH3BO43837 385 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 GPC4O75487 556 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 DFFBO76075 338 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 GH2P01242 217 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 IGHV3-13P01766 116 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 ACADMP11310 421 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 NMBRP28336 390 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 CDC25CP30307 473 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 LEPRP48357 1165 aaKnown RBP3.02□□□□□ -1.93
PTPN4-205ENST00000433888 CASP6P55212 293 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 TRA2BP62995 288 aaKnown RBP3.02□□□□□ -1.93
PTPN4-205ENST00000433888 TOMM20Q15388 145 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 TAF13Q15543 124 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 ACSM2BQ68CK6 577 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 JADE1Q6IE81 842 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 CLEC17AQ6ZS10 378 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 DIS3L2Q8IYB7 885 aaKnown RBP3.02□□□□□ -1.93
PTPN4-205ENST00000433888 Q8NBF4 154 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 ZNF519Q8TB69 540 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 ZPLD1Q8TCW7 415 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 ARHGEF2Q92974 986 aaKnown RBP3.02□□□□□ -1.93
PTPN4-205ENST00000433888 ELMOD3Q96FG2 381 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 C1orf74Q96LT6 269 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 PRICKLE1Q96MT3 831 aaPredicted RBP3.02□□□□□ -1.93
PTPN4-205ENST00000433888 DDOQ99489 341 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 KAT14Q9H8E8 782 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 HHATLQ9HCP6 504 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 PAG1Q9NWQ8 432 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 OSGIN1Q9UJX0 560 aa3.02□□□□□ -1.93
PTPN4-205ENST00000433888 COL4A4P53420 1690 aaPredicted RBP3.01□□□□□ -1.93
PTPN4-205ENST00000433888 C15orf61A6NNL5 157 aa3.01□□□□□ -1.93
PTPN4-205ENST00000433888 ZNF195O14628 629 aa3.01□□□□□ -1.93
PTPN4-205ENST00000433888 EPB41L2O43491 1005 aaKnown RBP3.01□□□□□ -1.93
PTPN4-205ENST00000433888 CD4P01730 458 aa3.01□□□□□ -1.93
PTPN4-205ENST00000433888 CLEC3BP05452 202 aa3.01□□□□□ -1.93
PTPN4-205ENST00000433888 LDHCP07864 332 aa3.01□□□□□ -1.93
PTPN4-205ENST00000433888 ACTN1P12814 892 aa3.01□□□□□ -1.93
PTPN4-205ENST00000433888 ITIH1P19827 911 aa3.01□□□□□ -1.93
PTPN4-205ENST00000433888 MMP12P39900 470 aa3.01□□□□□ -1.93
PTPN4-205ENST00000433888 GOLGA8DPQ0D2H9 430 aa3.01□□□□□ -1.93
PTPN4-205ENST00000433888 E2F5Q15329 346 aa3.01□□□□□ -1.93
PTPN4-205ENST00000433888 HPS6Q86YV9 775 aa3.01□□□□□ -1.93
PTPN4-205ENST00000433888 KCNG4Q8TDN1 519 aa3.01□□□□□ -1.93
PTPN4-205ENST00000433888 RNF128Q8TEB7 428 aa3.01□□□□□ -1.93
PTPN4-205ENST00000433888 SKA1Q96BD8 255 aa3.01□□□□□ -1.93
PTPN4-205ENST00000433888 FAM81BQ96LP2 452 aa3.01□□□□□ -1.93
PTPN4-205ENST00000433888 PANK3Q9H999 370 aa3.01□□□□□ -1.93
PTPN4-205ENST00000433888 ZDHHC2Q9UIJ5 367 aa3.01□□□□□ -1.93
PTPN4-205ENST00000433888 PPP1R3CQ9UQK1 317 aa3.01□□□□□ -1.93
PTPN4-205ENST00000433888 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.01□□□□□ -1.93
PTPN4-205ENST00000433888 MYH14Q7Z406 1995 aaKnown RBP3.01□□□□□ -1.93
PTPN4-205ENST00000433888 J3KRW8 73 aa3□□□□□ -1.93
PTPN4-205ENST00000433888 MBD4O95243 580 aa3□□□□□ -1.93
PTPN4-205ENST00000433888 IGKV3-15P01624 115 aa3□□□□□ -1.93
PTPN4-205ENST00000433888 TMEM11P17152 192 aa3□□□□□ -1.93
PTPN4-205ENST00000433888 PAX9P55771 341 aa3□□□□□ -1.93
PTPN4-205ENST00000433888 RPS3AP61247 264 aaKnown RBP3□□□□□ -1.93
PTPN4-205ENST00000433888 FASTKD3Q14CZ7 662 aaKnown RBP3□□□□□ -1.93
PTPN4-205ENST00000433888 MAPRE1Q15691 268 aaKnown RBP3□□□□□ -1.93
PTPN4-205ENST00000433888 TBCEQ15813 527 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms