RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 SLC38A3Q99624 504 aa14.96□□□□□ -0.01
CNOT9-205ENST00000433439 TRIT1Q9H3H1 467 aaKnown RBP14.96□□□□□ -0.01
CNOT9-205ENST00000433439 EVA1BQ9NVM1 165 aa14.96□□□□□ -0.01
CNOT9-205ENST00000433439 LRIT1Q9P2V4 623 aa14.96□□□□□ -0.01
CNOT9-205ENST00000433439 PLAGL1Q9UM63 463 aa14.96□□□□□ -0.01
CNOT9-205ENST00000433439 RNF215Q9Y6U7 377 aa14.96□□□□□ -0.01
CNOT9-205ENST00000433439 COLEC10Q9Y6Z7 277 aa14.96□□□□□ -0.01
CNOT9-205ENST00000433439 ZFHX2Q9C0A1 2572 aaPredicted RBP14.95□□□□□ -0.02
CNOT9-205ENST00000433439 ARID1BQ8NFD5 2236 aaPredicted RBP14.95□□□□□ -0.02
CNOT9-205ENST00000433439 KRT87PA6NCN2 255 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 EIF3FO00303 357 aaPredicted RBP14.95□□□□□ -0.02
CNOT9-205ENST00000433439 BTN3A1O00481 513 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 RGS16O15492 202 aaPredicted RBP14.95□□□□□ -0.02
CNOT9-205ENST00000433439 RFPL1O75677 317 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 TSPAN12O95859 305 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 CATP04040 527 aaKnown RBP14.95□□□□□ -0.02
CNOT9-205ENST00000433439 RPN2P04844 631 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 LTA4HP09960 611 aaKnown RBP14.95□□□□□ -0.02
CNOT9-205ENST00000433439 PYGBP11216 843 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 MAP4P27816 1152 aaKnown RBP14.95□□□□□ -0.02
CNOT9-205ENST00000433439 ALDH4A1P30038 563 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 GLRBP48167 497 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 DUSP3P51452 185 aaPredicted RBP14.95□□□□□ -0.02
CNOT9-205ENST00000433439 LIMK1P53667 647 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 UBE2IP63279 158 aaKnown RBP14.95□□□□□ -0.02
CNOT9-205ENST00000433439 PROX2Q3B8N5 592 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 TTC23LQ6PF05 361 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 UNC5DQ6UXZ4 953 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 UBE2R2Q712K3 238 aaPredicted RBP14.95□□□□□ -0.02
CNOT9-205ENST00000433439 FAM181AQ8N9Y4 354 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 CCDC74AQ96AQ1 378 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 NXNL1Q96CM4 212 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 TSNARE1Q96NA8 513 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 TMEM109Q9BVC6 243 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 MVB12BQ9H7P6 319 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 SYNDIG1Q9H7V2 258 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 POT1Q9NUX5 634 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 EURLQ9NYK6 297 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 ADAMTS6Q9UKP5 1117 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 IKZF3Q9UKT9 509 aa14.95□□□□□ -0.02
CNOT9-205ENST00000433439 CDV3Q9UKY7 258 aaKnown RBP14.95□□□□□ -0.02
CNOT9-205ENST00000433439 LY6G6EA0A0G2JKS1 128 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 PABPN1LA6NDY0 278 aaKnown RBP14.94□□□□□ -0.02
CNOT9-205ENST00000433439 ARHGEF33A8MVX0 844 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 CDC7O00311 574 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 ZBTB14O43829 449 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 WISP3O95389 354 aaPredicted RBP14.94□□□□□ -0.02
CNOT9-205ENST00000433439 MATN4O95460 622 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 C1orf105O95561 183 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 TOP3BO95985 862 aaKnown RBP14.94□□□□□ -0.02
CNOT9-205ENST00000433439 GLB1P16278 677 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 KCNA4P22459 653 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 NDUFS1P28331 727 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 MAGEA12P43365 314 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 DLG1Q12959 904 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 GPR18Q14330 331 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 RASA2Q15283 850 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 CCSMST1Q4G0I0 132 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 TIFABQ6ZNK6 161 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 C17orf82Q86X59 251 aaPredicted RBP14.94□□□□□ -0.02
CNOT9-205ENST00000433439 DCUN1D3Q8IWE4 304 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 TBC1D21Q8IYX1 336 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 PLD6Q8N2A8 252 aaKnown RBP14.94□□□□□ -0.02
CNOT9-205ENST00000433439 AVL9Q8NBF6 648 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 IFI44Q8TCB0 444 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 MZB1Q8WU39 189 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 EXT2Q93063 718 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 SH3KBP1Q96B97 665 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 SCYL1Q96KG9 808 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 NRTNQ99748 197 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 TBC1D10AQ9BXI6 508 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 DERL2Q9GZP9 239 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 ZMYND15Q9H091 742 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 SLC32A1Q9H598 525 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 XKR8Q9H6D3 395 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 SLC40A1Q9NP59 571 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 UTP6Q9NYH9 597 aaKnown RBP14.94□□□□□ -0.02
CNOT9-205ENST00000433439 NCKIPSDQ9NZQ3 722 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 LGALS13Q9UHV8 139 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 U3KQA8 63 aa14.94□□□□□ -0.02
CNOT9-205ENST00000433439 GOLGA6L10A6NI86 522 aa14.93□□□□□ -0.02
CNOT9-205ENST00000433439 PSIP1O75475 530 aaKnown RBP14.93□□□□□ -0.02
CNOT9-205ENST00000433439 C8GP07360 202 aa14.93□□□□□ -0.02
CNOT9-205ENST00000433439 CKMT1AP12532 417 aa14.93□□□□□ -0.02
CNOT9-205ENST00000433439 CD1DP15813 335 aa14.93□□□□□ -0.02
CNOT9-205ENST00000433439 CKMT2P17540 419 aa14.93□□□□□ -0.02
CNOT9-205ENST00000433439 TFEBP19484 476 aa14.93□□□□□ -0.02
CNOT9-205ENST00000433439 CYP2A7P20853 494 aa14.93□□□□□ -0.02
CNOT9-205ENST00000433439 FASLGP48023 281 aa14.93□□□□□ -0.02
CNOT9-205ENST00000433439 TSNQ15631 228 aaKnown RBP14.93□□□□□ -0.02
CNOT9-205ENST00000433439 AMZ1Q400G9 498 aa14.93□□□□□ -0.02
CNOT9-205ENST00000433439 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.93□□□□□ -0.02
CNOT9-205ENST00000433439 PERM1Q5SV97 790 aa14.93□□□□□ -0.02
CNOT9-205ENST00000433439 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.93□□□□□ -0.02
CNOT9-205ENST00000433439 TMEM26Q6ZUK4 368 aa14.93□□□□□ -0.02
CNOT9-205ENST00000433439 FRA10AC1Q70Z53 315 aa14.93□□□□□ -0.02
CNOT9-205ENST00000433439 CROCCP2Q86T23 111 aa14.93□□□□□ -0.02
CNOT9-205ENST00000433439 SRRM1Q8IYB3 904 aaKnown RBP14.93□□□□□ -0.02
CNOT9-205ENST00000433439 C4orf33Q8N1A6 199 aa14.93□□□□□ -0.02
CNOT9-205ENST00000433439 LMNTD1Q8N9Z9 388 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms