RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 PIN4Q9Y237 131 aaKnown RBP11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 PAGE1O75459 146 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 MSH3P20585 1137 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 HTR3AP46098 478 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 KRT6CP48668 564 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 HUNKP57058 714 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 GALNT3Q14435 633 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 GBX1Q14549 363 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 TIGD6Q17RP2 521 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 SV2CQ496J9 727 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 MRNIPQ6NTE8 343 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 PNCKQ6P2M8 343 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 OR56A4Q8NGH8 313 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 PCED1BQ96HM7 432 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 ZBTB18Q99592 522 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 SH3GL1Q99961 368 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 BBS2Q9BXC9 721 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 ZNF112Q9UJU3 913 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 FFAR3O14843 346 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 SLC16A6O15403 523 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 GPR42O15529 346 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 ICMTO60725 284 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 ALX3O95076 343 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 IFNA8P32881 189 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 KRT20P35900 424 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 GMPSP49915 693 aaPredicted RBP11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 DAPP51397 102 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 NUDT6P53370 316 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 MVKQ03426 396 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 RAD51Q06609 339 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 CDK10Q15131 360 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 TAB1Q15750 504 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 C18orf21Q32NC0 220 aaPredicted RBP11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 DCAF4L1Q3SXM0 396 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 CARD16Q5EG05 197 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 SIRPB2Q5JXA9 342 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 Q6ZPB1 254 aaPredicted RBP11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 ANKRD46Q86W74 232 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 REM2Q8IYK8 340 aaPredicted RBP11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 ELMOD2Q8IZ81 293 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 ZNF548Q8NEK5 533 aaPredicted RBP11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 KCTD13Q8WZ19 329 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 FAM120BQ96EK7 910 aaKnown RBP11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 GPR21Q99679 349 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 COPS4Q9BT78 406 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 MFSD1Q9H3U5 465 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 TFB2MQ9H5Q4 396 aaKnown RBP11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 GORASP2Q9H8Y8 452 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 CRTAC1Q9NQ79 661 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 VPS4AQ9UN37 437 aa11.34□□□□□ -0.59
HMGCS1-202ENST00000433297 SLC12A8A0AV02 714 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 CTDSP2O14595 271 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 KERAO60938 352 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 ENDOUP21128 410 aaKnown RBP11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 AKT1P31749 480 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 TGFBR2P37173 567 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 SLC26A3P40879 764 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 CTSKP43235 329 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 TIAL1Q01085 375 aaKnown RBP eCLIP11.33□□□□□ -0.62e-7■■■■■ 42.4
HMGCS1-202ENST00000433297 RFX4Q33E94 735 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 ARMC4Q5T2S8 1044 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 PM20D1Q6GTS8 502 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 DPP9Q86TI2 863 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 SLC13A3Q8WWT9 602 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 ARPC5LQ9BPX5 153 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 ABCG8Q9H221 673 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 CATSPERBQ9H7T0 1116 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 FBXL12Q9NXK8 326 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 COL11A2P13942 1736 aaPredicted RBP11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 GOLGA8CPA6NN73 597 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 SCO2O43819 266 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 FKBP9O95302 570 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 VIPP01282 170 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 PRR35P0CG20 571 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 SLC15A1P46059 708 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 SCNN1GP51170 649 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 ERVPABLB-1P60509 514 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 ZNF45Q02386 682 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 CREMQ03060 361 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 GRIK2Q13002 908 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 KRR1Q13601 381 aaKnown RBP11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 SPANXN4Q5MJ08 99 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 MARC1Q5VT66 337 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 SLX4IPQ5VYV7 408 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 LBX2Q6XYB7 198 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 PEX5LQ8IYB4 626 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 ZMIZ2Q8NF64 920 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 CDADC1Q9BWV3 514 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 TAS2R9Q9NYW1 312 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 OR2A25A4D2G3 310 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 DSCR3O14972 297 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 NPPAP01160 153 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 TUBA1BP68363 451 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 TTLL4Q14679 1199 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 GPR153Q6NV75 609 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 KDELC1Q6UW63 502 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 TUBA1AQ71U36 451 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 PRSS48Q7RTY5 328 aa11.33□□□□□ -0.6
HMGCS1-202ENST00000433297 AADATQ8N5Z0 425 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms