RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TMCO3Q6UWJ1 677 aa2.97□□□□□ -1.93
CLK1-204ENST00000432425 METTL7BQ6UX53 244 aa2.97□□□□□ -1.93
CLK1-204ENST00000432425 HAUS6Q7Z4H7 955 aa2.97□□□□□ -1.93
CLK1-204ENST00000432425 FAM114A1Q8IWE2 563 aa2.97□□□□□ -1.93
CLK1-204ENST00000432425 ZNF440Q8IYI8 595 aa2.97□□□□□ -1.93
CLK1-204ENST00000432425 ZNF614Q8N883 585 aa2.97□□□□□ -1.93
CLK1-204ENST00000432425 KBTBD8Q8NFY9 601 aa2.97□□□□□ -1.93
CLK1-204ENST00000432425 LRRC59Q96AG4 307 aaKnown RBP2.97□□□□□ -1.93
CLK1-204ENST00000432425 MOCOSQ96EN8 888 aa2.97□□□□□ -1.93
CLK1-204ENST00000432425 MAK16Q9BXY0 300 aaKnown RBP2.97□□□□□ -1.93
CLK1-204ENST00000432425 ZHX3Q9H4I2 956 aa2.97□□□□□ -1.93
CLK1-204ENST00000432425 INTS9Q9NV88 658 aaKnown RBP2.97□□□□□ -1.93
CLK1-204ENST00000432425 TMEM181Q9P2C4 612 aa2.97□□□□□ -1.93
CLK1-204ENST00000432425 LARSQ9P2J5 1176 aaKnown RBP2.97□□□□□ -1.93
CLK1-204ENST00000432425 RHCGQ9UBD6 479 aa2.97□□□□□ -1.93
CLK1-204ENST00000432425 ZNF69Q9UC07 566 aa2.97□□□□□ -1.93
CLK1-204ENST00000432425 ZNF644Q9H582 1327 aaPredicted RBP2.97□□□□□ -1.93
CLK1-204ENST00000432425 LOC101059948A0A1B0GTJ6 334 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 KRTAP16-1A8MUX0 517 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 HMGB1P1B2RPK0 211 aaPredicted RBP2.96□□□□□ -1.94
CLK1-204ENST00000432425 B4DLN1 442 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 VILLO15195 856 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 PTP4A3O75365 173 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 MAGEA11P43364 429 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 SUOXP51687 545 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 ARSEP51690 589 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 MRPL12P52815 198 aaKnown RBP2.96□□□□□ -1.94
CLK1-204ENST00000432425 PNRC1Q12796 327 aaPredicted RBP2.96□□□□□ -1.94
CLK1-204ENST00000432425 MAPRE1Q15691 268 aaKnown RBP2.96□□□□□ -1.94
CLK1-204ENST00000432425 GRTP1Q5TC63 336 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 WDR78Q5VTH9 848 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 LYG1Q8N1E2 194 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 SPEM1Q8N4L4 309 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 RAB42Q8N4Z0 105 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 PAPD5Q8NDF8 572 aaKnown RBP2.96□□□□□ -1.94
CLK1-204ENST00000432425 OR2T11Q8NH01 316 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 GRHL3Q8TE85 626 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 RNF128Q8TEB7 428 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 HPSE2Q8WWQ2 592 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 TIGD1Q96MW7 591 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 OR6C1Q96RD1 312 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 IWS1Q96ST2 819 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 SYT15Q9BQS2 421 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 PYGO2Q9BRQ0 406 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 SYT11Q9BT88 431 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 VN1R1Q9GZP7 353 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 SPATC1LQ9H0A9 340 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 SYNCQ9H7C4 482 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 PAK5Q9P286 719 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 SEC63Q9UGP8 760 aaKnown RBP2.96□□□□□ -1.94
CLK1-204ENST00000432425 HACL1Q9UJ83 578 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 RIPK3Q9Y572 518 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 SMAD5-AS1Q9Y6J3 95 aa2.96□□□□□ -1.94
CLK1-204ENST00000432425 ASTN2O75129 1339 aaPredicted RBP2.96□□□□□ -1.94
CLK1-204ENST00000432425 IGLV7-46A0A075B6I9 117 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 HYKKA2RU49 373 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 GAPDHSO14556 408 aaPredicted RBP2.95□□□□□ -1.94
CLK1-204ENST00000432425 KLF11O14901 512 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 BAIAP3O94812 1187 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 SORBS2O94875 1100 aaKnown RBP2.95□□□□□ -1.94
CLK1-204ENST00000432425 ZNF10P21506 573 aaPredicted RBP2.95□□□□□ -1.94
CLK1-204ENST00000432425 SP100P23497 879 aaPredicted RBP2.95□□□□□ -1.94
CLK1-204ENST00000432425 PSMB10P40306 273 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 SNX16P57768 344 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 CXCL9Q07325 125 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 DMPKQ09013 629 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 SGSM1Q2NKQ1 1148 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 PSRC1Q6PGN9 363 aaPredicted RBP2.95□□□□□ -1.94
CLK1-204ENST00000432425 CFAP206Q8IYR0 622 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 TEX19Q8NA77 164 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 NAP1L4Q99733 375 aaKnown RBP2.95□□□□□ -1.94
CLK1-204ENST00000432425 VGLL1Q99990 258 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 RBM4BQ9BQ04 359 aaKnown RBP2.95□□□□□ -1.94
CLK1-204ENST00000432425 C16orf70Q9BSU1 422 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 FNDC11Q9BVV2 318 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 CDK19Q9BWU1 502 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 PITPNM3Q9BZ71 974 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 LAT2Q9GZY6 243 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 KCNK15Q9H427 330 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 A4GALTQ9NPC4 353 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 ARHGEF38Q9NXL2 777 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 ZDHHC2Q9UIJ5 367 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 ZNF148Q9UQR1 794 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 GRIP1Q9Y3R0 1128 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 SOS1Q07889 1333 aaPredicted RBP2.95□□□□□ -1.94
CLK1-204ENST00000432425 PRAMEF11O60813 436 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 ZBED4O75132 1171 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 CA4P22748 312 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 CA6P23280 308 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 SLC6A6P31641 620 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 DEKP35659 375 aaKnown RBP2.95□□□□□ -1.94
CLK1-204ENST00000432425 SLC15A1P46059 708 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 SIRPAP78324 504 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 IRF3Q14653 427 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 NR1D2Q14995 579 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 RAB41Q5JT25 222 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 TBC1D1Q86TI0 1168 aaPredicted RBP2.95□□□□□ -1.94
CLK1-204ENST00000432425 LDB1Q86U70 411 aaPredicted RBP2.95□□□□□ -1.94
CLK1-204ENST00000432425 PIGZQ86VD9 579 aa2.95□□□□□ -1.94
CLK1-204ENST00000432425 COMMD2Q86X83 199 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms