RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 SMU1Q2TAY7 513 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 N4BP2L1Q5TBK1 243 aaPredicted RBP7.1□□□□□ -1.27
CNOT4-206ENST00000428680 SYPL2Q5VXT5 272 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 HFE2Q6ZVN8 426 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 SLC41A1Q8IVJ1 513 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 COX18Q8N8Q8 333 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 PJA1Q8NG27 643 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 ZNF607Q96SK3 696 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 CHRDQ9H2X0 955 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 TMEM245Q9H330 911 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 EFCAB1Q9HAE3 211 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 ARHGAP20Q9P2F6 1191 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 KCND3Q9UK17 655 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 BLOC1S6Q9UL45 172 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 PCDHGC3Q9UN70 934 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 LYVE1Q9Y5Y7 322 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 WASF2Q9Y6W5 498 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 NCOR1O75376 2440 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 CCT8L1PA6NM43 557 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 ZNF726A6NNF4 738 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 ZBTB42B2RXF5 422 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 MATN2O00339 956 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 DCLK1O15075 740 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 PECAM1P16284 738 aaPredicted RBP7.1□□□□□ -1.27
CNOT4-206ENST00000428680 ACVRL1P37023 503 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 GRIA4P48058 902 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 PNLIPRP1P54315 467 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 GBE1Q04446 702 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 FAM153CQ494X1 144 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 SLC9A4Q6AI14 798 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 ADGRG6Q86SQ4 1221 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 PRSS33Q8NF86 280 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 RP9Q8TA86 221 aaKnown RBP7.1□□□□□ -1.27
CNOT4-206ENST00000428680 GPR151Q8TDV0 419 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 ARRDC3Q96B67 414 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 GPR21Q99679 349 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 SMOQ99835 787 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 HERPUD2Q9BSE4 406 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 ZDHHC5Q9C0B5 715 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 PIF1Q9H611 641 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 TRPS1Q9UHF7 1281 aa7.1□□□□□ -1.27
CNOT4-206ENST00000428680 FNDC1Q4ZHG4 1894 aaPredicted RBP7.09□□□□□ -1.27
CNOT4-206ENST00000428680 A0A0G2JN53 185 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 OR6C74A6NCV1 312 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 TTC34A8MYJ7 566 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 ERI3O43414 337 aaKnown RBP7.09□□□□□ -1.27
CNOT4-206ENST00000428680 KIF1CO43896 1103 aaKnown RBP7.09□□□□□ -1.27
CNOT4-206ENST00000428680 PDE9AO76083 593 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 CYB5AP00167 134 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 CCND1P24385 295 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 OR4D2P58180 307 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 RPL38P63173 70 aaKnown RBP7.09□□□□□ -1.27
CNOT4-206ENST00000428680 C2orf80Q0P641 193 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 CHIT1Q13231 466 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 GRM7Q14831 915 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 TAF1AQ15573 450 aaPredicted RBP7.09□□□□□ -1.27
CNOT4-206ENST00000428680 RALGPS1Q5JS13 557 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 FAM91A1Q658Y4 838 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 TMEM198Q66K66 360 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 LRRC66Q68CR7 880 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 IYDQ6PHW0 289 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 TTLL10Q6ZVT0 673 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 TRIM74Q86UV6 250 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 METTL27Q8N6F8 245 aaPredicted RBP7.09□□□□□ -1.27
CNOT4-206ENST00000428680 SPATA22Q8NHS9 363 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 HM13Q8TCT9 377 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 TMEM40Q8WWA1 233 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 SLC13A3Q8WWT9 602 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 MIEF2Q96C03 454 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 RNF31Q96EP0 1072 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 LTB4R2Q9NPC1 389 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 SCN3BQ9NY72 215 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 PCDHGA11Q9Y5H2 935 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 SPIN1Q9Y657 262 aaPredicted RBP7.09□□□□□ -1.27
CNOT4-206ENST00000428680 HS3ST4Q9Y661 456 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 A0A1B0GVT2 93 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 SEC31AO94979 1220 aaKnown RBP7.09□□□□□ -1.27
CNOT4-206ENST00000428680 CTHP32929 405 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 RPS3AP61247 264 aaKnown RBP7.09□□□□□ -1.27
CNOT4-206ENST00000428680 ANXA8L1Q5VT79 327 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 PRAMEF13Q5VWM6 474 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 CASP12Q6UXS9 341 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 LYSMD3Q7Z3D4 306 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 FGD2Q7Z6J4 655 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 KRT77Q7Z794 578 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 LSMEM2Q8N112 164 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 MPP5Q8N3R9 675 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 TCEAL4Q96EI5 215 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 APOLD1Q96LR9 279 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 KCTD15Q96SI1 283 aaPredicted RBP7.09□□□□□ -1.27
CNOT4-206ENST00000428680 PAAF1Q9BRP4 392 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 CRB3Q9BUF7 120 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 RACGAP1Q9H0H5 632 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 EPB41L4BQ9H329 900 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 TMEM216Q9P0N5 145 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 ZNF624Q9P2J8 865 aaPredicted RBP7.09□□□□□ -1.27
CNOT4-206ENST00000428680 DNMT3AQ9Y6K1 912 aaPredicted RBP7.09□□□□□ -1.27
CNOT4-206ENST00000428680 DENND4AQ7Z401 1863 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 CCDC154A6NI56 674 aa7.09□□□□□ -1.27
CNOT4-206ENST00000428680 MKRN2OSH3BPM6 223 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms