RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 PRPF4O43172 522 aaKnown RBP eCLIP13.11□□□□□ -0.31
PRPF39-202ENST00000424478 IDSP22304 550 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 ACADLP28330 430 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 MAZP56270 477 aaKnown RBP13.11□□□□□ -0.31
PRPF39-202ENST00000424478 YBX1P67809 324 aaKnown RBP13.11□□□□□ -0.31
PRPF39-202ENST00000424478 TEAD4Q15561 434 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 PPP1R3AQ16821 1122 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 ATG14Q6ZNE5 492 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 SLC25A45Q8N413 288 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 FAM76AQ8TAV0 307 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 ASB11Q8WXH4 323 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 GLMNQ92990 594 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 FERD3LQ96RJ6 166 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 EGFL8Q99944 293 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 CD274Q9NZQ7 290 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 DOLKQ9UPQ8 538 aa13.11□□□□□ -0.31
PRPF39-202ENST00000424478 CELSR3Q9NYQ7 3312 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 BGNP21810 368 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 CNR2P34972 360 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 ACAP2Q15057 778 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 TGFBIQ15582 683 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 HHATQ5VTY9 493 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 KLC3Q6P597 504 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 GPSM1Q86YR5 675 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 FAM20CQ8IXL6 584 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 NAGSQ8N159 534 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 ATOH1Q92858 354 aaPredicted RBP13.1□□□□□ -0.31
PRPF39-202ENST00000424478 KIAA1191Q96A73 305 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 CABS1Q96KC9 395 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 MRPL46Q9H2W6 279 aaKnown RBP13.1□□□□□ -0.31
PRPF39-202ENST00000424478 RMI1Q9H9A7 625 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 NKIRAS1Q9NYS0 192 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 ACTL7BQ9Y614 415 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 GVINP1Q7Z2Y8 2422 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 SNRNP200O75643 2136 aaKnown RBP13.1□□□□□ -0.31
PRPF39-202ENST00000424478 C17orf113A0A1B0GUU1 675 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 TARM1B6A8C7 271 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 PPP6CO00743 305 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 GFAPP14136 432 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 ALDH3A1P30838 453 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 SERPINB4P48594 390 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 PDZD3Q86UT5 571 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 IQCHQ86VS3 1027 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 AGR3Q8TD06 166 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 GPBAR1Q8TDU6 330 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 PRR11Q96HE9 360 aaPredicted RBP13.1□□□□□ -0.31
PRPF39-202ENST00000424478 NSUN5Q96P11 429 aaKnown RBP13.1□□□□□ -0.31
PRPF39-202ENST00000424478 ELF4Q99607 663 aaPredicted RBP13.1□□□□□ -0.31
PRPF39-202ENST00000424478 TRNAU1APQ9NX07 287 aaKnown RBP13.1□□□□□ -0.31
PRPF39-202ENST00000424478 ARL15Q9NXU5 204 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 PRR19A6NJB7 356 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 AGRPO00253 132 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 AQP9O43315 295 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 PIAS2O75928 621 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 MATN4O95460 622 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 TPBGLP0DKB5 382 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 CPA3P15088 417 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 VCLP18206 1134 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 CD9P21926 228 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 RPIAP49247 311 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 CDH13P55290 713 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 SPEM2Q0P670 501 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 FASTKQ14296 549 aaKnown RBP13.1□□□□□ -0.31
PRPF39-202ENST00000424478 RPE65Q16518 533 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 SUSD1Q6UWL2 747 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 PTGR2Q8N8N7 351 aaPredicted RBP13.1□□□□□ -0.31
PRPF39-202ENST00000424478 INTS9Q9NV88 658 aaKnown RBP13.1□□□□□ -0.31
PRPF39-202ENST00000424478 COPG2Q9UBF2 871 aa13.1□□□□□ -0.31
PRPF39-202ENST00000424478 A8MT66 165 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 GPR89AB7ZAQ6 455 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 C1orf105O95561 183 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 GPR89BP0CG08 455 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 NEFHP12036 1026 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 SLC19A1P41440 591 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 CCNYL1Q8N7R7 359 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 SLC37A2Q8TED4 501 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 DYDC1Q8WWB3 177 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 RAB23Q9ULC3 237 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 ASPMQ8IZT6 3477 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 IFRD1O00458 451 aaPredicted RBP13.09□□□□□ -0.31
PRPF39-202ENST00000424478 KPNA5O15131 536 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 LYPLA1O75608 230 aaPredicted RBP13.09□□□□□ -0.31
PRPF39-202ENST00000424478 SLC16A8O95907 504 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 ARRB2P32121 409 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 HSPA7P48741 367 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 OVGP1Q12889 678 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 KRT33BQ14525 404 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 UAP1L1Q3KQV9 507 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 C11orf74Q86VG3 221 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 STAG3L4Q8TBR4 150 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 TMEM237Q96Q45 408 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 PKP4Q99569 1192 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 MRPL57Q9BQC6 102 aaKnown RBP13.09□□□□□ -0.31
PRPF39-202ENST00000424478 ACAT2Q9BWD1 397 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 CAPN10Q9HC96 672 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 NCKIPSDQ9NZQ3 722 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 DCHS1Q96JQ0 3298 aa13.09□□□□□ -0.31
PRPF39-202ENST00000424478 A0A1B0GTL3 188 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 LNP1A1A4G5 178 aa13.08□□□□□ -0.32
PRPF39-202ENST00000424478 A6NCN8 305 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms