RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 STAT5AP42229 794 aa17.3■□□□□ 0.36
SBDSP1-202ENST00000423945 ABHD18Q0P651 414 aa17.3■□□□□ 0.36
SBDSP1-202ENST00000423945 TUBB3Q13509 450 aa17.3■□□□□ 0.36
SBDSP1-202ENST00000423945 MAP7Q14244 749 aa17.3■□□□□ 0.36
SBDSP1-202ENST00000423945 TYSND1Q2T9J0 566 aa17.3■□□□□ 0.36
SBDSP1-202ENST00000423945 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.3■□□□□ 0.36
SBDSP1-202ENST00000423945 SYTL3Q4VX76 610 aa17.3■□□□□ 0.36
SBDSP1-202ENST00000423945 CTSL3PQ5NE16 218 aa17.3■□□□□ 0.36
SBDSP1-202ENST00000423945 KIAA0930Q6ICG6 404 aaPredicted RBP17.3■□□□□ 0.36
SBDSP1-202ENST00000423945 ARMC6Q6NXE6 501 aa17.3■□□□□ 0.36
SBDSP1-202ENST00000423945 AMIGO1Q86WK6 493 aa17.3■□□□□ 0.36
SBDSP1-202ENST00000423945 TBC1D21Q8IYX1 336 aa17.3■□□□□ 0.36
SBDSP1-202ENST00000423945 CARFQ8N187 725 aa17.3■□□□□ 0.36
SBDSP1-202ENST00000423945 OR5K2Q8NHB8 316 aa17.3■□□□□ 0.36
SBDSP1-202ENST00000423945 WBP1Q96G27 269 aa17.3■□□□□ 0.36
SBDSP1-202ENST00000423945 BIRC8Q96P09 236 aa17.3■□□□□ 0.36
SBDSP1-202ENST00000423945 PITPNM3Q9BZ71 974 aa17.3■□□□□ 0.36
SBDSP1-202ENST00000423945 DDX47Q9H0S4 455 aaKnown RBP17.3■□□□□ 0.36
SBDSP1-202ENST00000423945 IL1RAPL1Q9NZN1 696 aa17.3■□□□□ 0.36
SBDSP1-202ENST00000423945 IL17BQ9UHF5 180 aa17.3■□□□□ 0.36
SBDSP1-202ENST00000423945 BTRCQ9Y297 605 aa17.3■□□□□ 0.36
SBDSP1-202ENST00000423945 SLC9B1P1A6NJY1 282 aa17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 TERTO14746 1132 aaKnown RBP17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 ZBTB11O95625 1053 aaPredicted RBP17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 F7P08709 466 aaPredicted RBP17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 ST6GAL1P15907 406 aa17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 F8A1P23610 371 aa17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 PPARGP37231 505 aaPredicted RBP17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 HSD11B2P80365 405 aa17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 SARNPP82979 210 aaKnown RBP17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 PLOD1Q02809 727 aaPredicted RBP17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 HSPA14Q0VDF9 509 aa17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 PRKAA1Q13131 559 aa17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 LY6DQ14210 128 aa17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 GPR19Q15760 415 aa17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 PAPD7Q5XG87 772 aaKnown RBP17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 PWWP2BQ6NUJ5 590 aa17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 UNC5AQ6ZN44 842 aa17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 CENPUQ71F23 418 aa17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 PPP1R3BQ86XI6 285 aa17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 RASGRP3Q8IV61 690 aa17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 GALNT6Q8NCL4 622 aa17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 FLVCR1-AS1Q8TAF5 88 aa17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 LPGAT1Q92604 370 aa17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 ZNF501Q96CX3 271 aaPredicted RBP17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 SIGLEC10Q96LC7 697 aa17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 C1GALT1Q9NS00 363 aa17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 FGF21Q9NSA1 209 aa17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 SPHK1Q9NYA1 384 aa17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 PLAGL1Q9UM63 463 aa17.29■□□□□ 0.36
SBDSP1-202ENST00000423945 ZCWPW2A0A1B0GU75 182 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 GSAPA4D1B5 854 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 MATN2O00339 956 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 NDUFS3O75489 264 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 SLCO2B1O94956 709 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 PVRP15151 417 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 TCP1P17987 556 aaKnown RBP17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 CDH3P22223 829 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 PEBP1P30086 187 aaKnown RBP17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 PTGIRP43119 386 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 ACY1Q03154 408 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 GRB7Q14451 532 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 ANKRD20A4Q4UJ75 823 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 TAF1BQ53T94 588 aaPredicted RBP17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 ZNF789Q5FWF6 425 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 RNASEH2BQ5TBB1 312 aaKnown RBP17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 ARMC3Q5W041 872 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 C6orf15Q6UXA7 325 aaPredicted RBP17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 TMEM135Q86UB9 458 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 CREG2Q8IUH2 290 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 ESX1Q8N693 406 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 EXD3Q8N9H8 876 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 GRK7Q8WTQ7 553 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 EXTL1Q92935 676 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 SLCO2A1Q92959 643 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 SLC45A3Q96JT2 553 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 TRAPPC9Q96Q05 1148 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 MENTQ9BUN1 341 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 TRIT1Q9H3H1 467 aaKnown RBP17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 AKIRIN1Q9H9L7 192 aaPredicted RBP17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 GPN2Q9H9Y4 310 aaPredicted RBP17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 XAB2Q9HCS7 855 aaKnown RBP17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 PDE7BQ9NP56 450 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 ACTR10Q9NZ32 417 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 GNPTGQ9UJJ9 305 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 RARRES3Q9UL19 164 aa17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 TDRKHQ9Y2W6 561 aaKnown RBP17.28■□□□□ 0.36
SBDSP1-202ENST00000423945 BSNQ9UPA5 3926 aa17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 GOLGA6L10A0A0M3HER8 536 aa17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 FAM237BA0A1B0GVD1 139 aa17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 SDR42E2A6NKP2 422 aa17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 IVDP26440 423 aa17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 EIF3BP55884 814 aaKnown RBP17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 GNG11P61952 73 aa17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 TUBB4BP68371 445 aa17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 TUBB2AQ13885 445 aa17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 TBR1Q16650 682 aa17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 DNAJC21Q5F1R6 531 aaKnown RBP17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 PTRHD1Q6GMV3 140 aaKnown RBP17.27■□□□□ 0.36
SBDSP1-202ENST00000423945 CASC4Q6P4E1 433 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms