RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 COMMD3-BMI1R4GMX3 469 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 TRMUO75648 421 aaKnown RBP13.07□□□□□ -0.32
MCF2L-213ENST00000421756 TRBC1P01850 177 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 HIST1H2AGP0C0S8 130 aaPredicted RBP13.07□□□□□ -0.32
MCF2L-213ENST00000421756 HIST1H2ADP20671 130 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 HLA-FP30511 346 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 CCR7P32248 378 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 SLC26A3P40879 764 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 TRAP1Q12931 704 aaKnown RBP13.07□□□□□ -0.32
MCF2L-213ENST00000421756 CCDC81Q6ZN84 652 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 FRS2Q8WU20 508 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 SLC13A3Q8WWT9 602 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 ELMO1Q92556 727 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 HIST1H2AHQ96KK5 128 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 NRTNQ99748 197 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 HIST1H2AJQ99878 128 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 H2AFJQ9BTM1 129 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 ATP13A3Q9H7F0 1226 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 PNPLA3Q9NST1 481 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 FNIP2Q9P278 1114 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 GNPTGQ9UJJ9 305 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 WNT6Q9Y6F9 365 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 LSM1O15116 133 aaKnown RBP13.07□□□□□ -0.32
MCF2L-213ENST00000421756 PFDN1O60925 122 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 DGKAP23743 735 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 SERPINA4P29622 427 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 ETV3P41162 512 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 HSPA13P48723 471 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 MEF2AQ02078 507 aaPredicted RBP13.07□□□□□ -0.32
MCF2L-213ENST00000421756 GALNT1Q10472 559 aaPredicted RBP13.07□□□□□ -0.32
MCF2L-213ENST00000421756 C16orf72Q14CZ0 275 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 UAP1L1Q3KQV9 507 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 PLEKHG6Q3KR16 790 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 IER5LQ5T953 404 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 OR4F3Q6IEY1 312 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 CRTC1Q6UUV9 634 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 MINDY1Q8N5J2 469 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 ADAMTS19Q8TE59 1207 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 HSPBAP1Q96EW2 488 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 B4GALT6Q9UBX8 382 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 VPS9D1Q9Y2B5 631 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 PTPRDP23468 1912 aa13.07□□□□□ -0.32
MCF2L-213ENST00000421756 SMIM31A0A1B0GVY4 71 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 A0A1W2PPW3 197 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 TGM5O43548 720 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 PDYNP01213 254 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 C8AP07357 584 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 LHCGRP22888 699 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 SUOXP51687 545 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 TRAF3Q13114 568 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 CCSMST1Q4G0I0 132 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 HID1Q8IV36 788 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 TPD52L3Q96J77 140 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 COMMD8Q9NX08 183 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 ANKRD36A6QL64 1941 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 PRR23AA6NEV1 266 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 BBIP1A8MTZ0 92 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 H3BNH8 94 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 MITFO75030 526 aaPredicted RBP13.06□□□□□ -0.32
MCF2L-213ENST00000421756 IGSF6O95976 241 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 CDH2P19022 906 aaPredicted RBP13.06□□□□□ -0.32
MCF2L-213ENST00000421756 VARSP26640 1264 aaKnown RBP13.06□□□□□ -0.32
MCF2L-213ENST00000421756 PPP3CCP48454 512 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 PMS2P3Q13401 168 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 LSAMPQ13449 338 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 DGCR6Q14129 220 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 MEP1AQ16819 746 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 TFAP2CQ92754 450 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 SDCCAG3Q96C92 435 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 FAM120BQ96EK7 910 aaKnown RBP13.06□□□□□ -0.32
MCF2L-213ENST00000421756 ZFYVE19Q96K21 471 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 MYRFLQ96LU7 910 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 CCDC138Q96M89 665 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 CWH43Q9H720 699 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 AGPAT4Q9NRZ5 378 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 GPRC5BQ9NZH0 403 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 RSL24D1Q9UHA3 163 aaKnown RBP13.06□□□□□ -0.32
MCF2L-213ENST00000421756 FAM234BA2RU67 622 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 IFRD1O00458 451 aaPredicted RBP13.06□□□□□ -0.32
MCF2L-213ENST00000421756 CXCL14O95715 111 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 PGRP06401 933 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 DNAJB1P25685 340 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 CDKN2CP42773 168 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 RECQLP46063 649 aaPredicted RBP13.06□□□□□ -0.32
MCF2L-213ENST00000421756 GNPDA1P46926 289 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 CLCN2P51788 898 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 NKG7Q16617 165 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 CACHD1Q5VU97 1274 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 TXNDC11Q6PKC3 985 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 SPATA19Q7Z5L4 167 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 SNX20Q7Z614 316 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 C9orf16Q9BUW7 83 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 LRRC3Q9BY71 257 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 AMBNQ9NP70 447 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 SMPD3Q9NY59 655 aaPredicted RBP13.06□□□□□ -0.32
MCF2L-213ENST00000421756 PKD2L2Q9NZM6 624 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 ZNF451Q9Y4E5 1061 aa13.06□□□□□ -0.32
MCF2L-213ENST00000421756 SOD2P04179 222 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 PPP4R4Q6NUP7 873 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 KCTD8Q6ZWB6 473 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms