RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 TACO1Q9BSH4 297 aaKnown RBP8.21□□□□□ -1.09
USP54-203ENST00000418501 BOCQ9BWV1 1114 aa8.21□□□□□ -1.09
USP54-203ENST00000418501 PITHD1Q9GZP4 211 aaPredicted RBP8.21□□□□□ -1.09
USP54-203ENST00000418501 SPAG4Q9NPE6 437 aa8.21□□□□□ -1.09
USP54-203ENST00000418501 ASF1AQ9Y294 204 aa8.21□□□□□ -1.09
USP54-203ENST00000418501 ARHGAP10A1A4S6 786 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 FAM234BA2RU67 622 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 CAPN14A8MX76 684 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 PRRT4C9JH25 899 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 NR5A2O00482 541 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 AREL1O15033 823 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 GSTA4O15217 222 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 SLCO2B1O94956 709 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 IL10P22301 178 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 HRH2P25021 359 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 KCNJ2P63252 427 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 CNTN1Q12860 1018 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 NFYCQ13952 458 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 ARHGAP19Q14CB8 494 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 XKR6Q5GH73 641 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 HORMAD1Q86X24 394 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 NATD1Q8N6N6 113 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 RBM15BQ8NDT2 890 aaKnown RBP8.21□□□□□ -1.1
USP54-203ENST00000418501 LINC00615Q96LM1 132 aaPredicted RBP8.21□□□□□ -1.1
USP54-203ENST00000418501 LENG8Q96PV6 779 aaPredicted RBP8.21□□□□□ -1.1
USP54-203ENST00000418501 BTBD1Q9H0C5 482 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 ZNF395Q9H8N7 513 aaPredicted RBP8.21□□□□□ -1.1
USP54-203ENST00000418501 C1orf109Q9NX04 203 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 TAS2R1Q9NYW7 299 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 ZNHIT2Q9UHR6 403 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 MIA3Q5JRA6 1907 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 PRMT3O60678 531 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 RSL1D1O76021 490 aaKnown RBP8.21□□□□□ -1.1
USP54-203ENST00000418501 SIX3O95343 332 aaPredicted RBP8.21□□□□□ -1.1
USP54-203ENST00000418501 MATN4O95460 622 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 F7P08709 466 aaPredicted RBP8.21□□□□□ -1.1
USP54-203ENST00000418501 LINC00032P0C843 101 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 PRSS56P0CW18 603 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 P2RY2P41231 377 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 SEC13P55735 322 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 CSTF3Q12996 717 aaKnown RBP8.21□□□□□ -1.1
USP54-203ENST00000418501 FLOT2Q14254 428 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 VWA5B1Q5TIE3 1220 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 EGFLAMQ63HQ2 1017 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 ULK2Q8IYT8 1036 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 FBXW8Q8N3Y1 598 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 ZNF366Q8N895 744 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 TTLQ8NG68 377 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 OR9A1PQ8NGU1 263 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 OR52B2Q96RD2 323 aa8.21□□□□□ -1.1
USP54-203ENST00000418501 ZNF490Q9ULM2 529 aaPredicted RBP8.21□□□□□ -1.1
USP54-203ENST00000418501 COPG1Q9Y678 874 aaKnown RBP8.21□□□□□ -1.1
USP54-203ENST00000418501 IQCF5A8MTL0 148 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 NVLO15381 856 aaKnown RBP8.2□□□□□ -1.1
USP54-203ENST00000418501 GUCY1B2O75343 617 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 HNRNPH1P31943 449 aaKnown RBP8.2□□□□□ -1.1
USP54-203ENST00000418501 HPCAL1P37235 193 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 PSME3P61289 254 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 ACSM2AQ08AH3 577 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 LRRC73Q5JTD7 316 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 ACSM2BQ68CK6 577 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 TMEM215Q68D42 235 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 CLEC6AQ6EIG7 209 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 MED27Q6P2C8 311 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 DOK6Q6PKX4 331 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 PARM1Q6UWI2 310 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 TMEM207Q6UWW9 146 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 PAGE2Q7Z2X7 111 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 R3HCC1LQ7Z5L2 792 aaKnown RBP8.2□□□□□ -1.1
USP54-203ENST00000418501 SLC22A15Q8IZD6 547 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 LSMEM2Q8N112 164 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 OR2L2Q8NH16 312 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 TIMM29Q9BSF4 260 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 RAD21L1Q9H4I0 556 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 RNPEPL1Q9HAU8 725 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 ATAD3AQ9NVI7 634 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 CCDC167Q9P0B6 97 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 CORO2BQ9UQ03 480 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 EVPLLA8MZ36 301 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 ANP32DO95626 131 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 BAG2O95816 211 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 IL6P05231 212 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 SBK3P0C264 359 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 FCGR1AP12314 374 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 CTHP32929 405 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 WASP42768 502 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 CREB5Q02930 508 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 RALGDSQ12967 914 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 HTR4Q13639 388 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 AP5B1Q2VPB7 878 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 FBXW10Q5XX13 1052 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 PNCKQ6P2M8 343 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 C17orf64Q86WR6 236 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 AIF1LQ9BQI0 150 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 MVB12BQ9H7P6 319 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 AKTIPQ9H8T0 292 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 DNAAF2Q9NVR5 837 aaKnown RBP8.2□□□□□ -1.1
USP54-203ENST00000418501 GALPQ9UBC7 116 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 FBXL21Q9UKT6 434 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 MID1O15344 667 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms