RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 LRRC8BQ6P9F7 803 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 TAS2R42Q7RTR8 314 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 PLXDC1Q8IUK5 500 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 PHYKPLQ8IUZ5 450 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 PIANPQ8IYJ0 282 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 AGGF1Q8N302 714 aaeCLIP17.52■□□□□ 0.4
VCP-202ENST00000417448 NAT8LQ8N9F0 302 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 OR13J1Q8NGT2 312 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 STYXQ8WUJ0 223 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 HDAC10Q969S8 669 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 ING2Q9H160 280 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 SLC23A2Q9UGH3 650 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 PADI1Q9ULC6 663 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 KCNK6Q9Y257 313 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 TCAF1Q9Y4C2 921 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 POLEQ07864 2286 aa17.52■□□□□ 0.4
VCP-202ENST00000417448 HEATR9A2RTY3 570 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 C21orf140B9A014 251 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 DNALI1O14645 258 aaPredicted RBP17.51■□□□□ 0.39
VCP-202ENST00000417448 GRID2O43424 1007 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 NUAK1O60285 661 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 SPAG6O75602 509 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 CDK14O94921 469 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 CCNYL3P0C7X3 344 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 FGF5P12034 268 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 ACP5P13686 325 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 MAGEA6P43360 314 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 LEPRP48357 1165 aaKnown RBP17.51■□□□□ 0.39
VCP-202ENST00000417448 NPY2RP49146 381 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 CTSCP53634 463 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 PDE1BQ01064 536 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 TMEM115Q12893 351 aaPredicted RBP17.51■□□□□ 0.39
VCP-202ENST00000417448 IL11RAQ14626 422 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 RNASEH2BQ5TBB1 312 aaKnown RBP17.51■□□□□ 0.39
VCP-202ENST00000417448 BEND7Q8N7W2 519 aaPredicted RBP17.51■□□□□ 0.39
VCP-202ENST00000417448 RBMXL3Q8N7X1 1067 aaKnown RBP17.51■□□□□ 0.39
VCP-202ENST00000417448 RASGEF1AQ8N9B8 481 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 PPHLN1Q8NEY8 458 aaKnown RBP17.51■□□□□ 0.39
VCP-202ENST00000417448 THAP4Q8WY91 577 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 SLCO2A1Q92959 643 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 MARVELD3Q96A59 401 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 SH3KBP1Q96B97 665 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 VPS35Q96QK1 796 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 STN1Q9H668 368 aaKnown RBP17.51■□□□□ 0.39
VCP-202ENST00000417448 SLAMF7Q9NQ25 335 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 ACSS2Q9NR19 701 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 BFARQ9NZS9 450 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 CRLS1Q9UJA2 301 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 CDC23Q9UJX2 597 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 SNX24Q9Y343 169 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 SLC30A1Q9Y6M5 507 aa17.51■□□□□ 0.39
VCP-202ENST00000417448 LILRA5A6NI73 299 aa17.5■□□□□ 0.39
VCP-202ENST00000417448 OR2AG2A6NM03 316 aa17.5■□□□□ 0.39
VCP-202ENST00000417448 RAD51CO43502 376 aa17.5■□□□□ 0.39
VCP-202ENST00000417448 CEACAM4O75871 244 aa17.5■□□□□ 0.39
VCP-202ENST00000417448 AKT1P31749 480 aa17.5■□□□□ 0.39
VCP-202ENST00000417448 HADHAP40939 763 aa17.5■□□□□ 0.39
VCP-202ENST00000417448 ITGA9Q13797 1035 aa17.5■□□□□ 0.39
VCP-202ENST00000417448 PCID2Q5JVF3 399 aa17.5■□□□□ 0.39
VCP-202ENST00000417448 HP1BP3Q5SSJ5 553 aaPredicted RBP17.5■□□□□ 0.39
VCP-202ENST00000417448 ZDHHC20Q5W0Z9 365 aa17.5■□□□□ 0.39
VCP-202ENST00000417448 PDPK2PQ6A1A2 396 aa17.5■□□□□ 0.39
VCP-202ENST00000417448 FAM199XQ6PEV8 388 aaPredicted RBP17.5■□□□□ 0.39
VCP-202ENST00000417448 LDB1Q86U70 411 aaPredicted RBP17.5■□□□□ 0.39
VCP-202ENST00000417448 SLC9B2Q86UD5 537 aa17.5■□□□□ 0.39
VCP-202ENST00000417448 ZNF547Q8IVP9 402 aa17.5■□□□□ 0.39
VCP-202ENST00000417448 PPIL6Q8IXY8 311 aa17.5■□□□□ 0.39
VCP-202ENST00000417448 OR6P1Q8NGX9 317 aa17.5■□□□□ 0.39
VCP-202ENST00000417448 TGM7Q96PF1 710 aa17.5■□□□□ 0.39
VCP-202ENST00000417448 RANBP9Q96S59 729 aa17.5■□□□□ 0.39
VCP-202ENST00000417448 DPH5Q9H2P9 285 aa17.5■□□□□ 0.39
VCP-202ENST00000417448 EPB41L1Q9H4G0 881 aa17.5■□□□□ 0.39
VCP-202ENST00000417448 VPS18Q9P253 973 aa17.5■□□□□ 0.39
VCP-202ENST00000417448 CPNE7Q9UBL6 633 aa17.5■□□□□ 0.39
VCP-202ENST00000417448 DNAJC16Q9Y2G8 782 aa17.5■□□□□ 0.39
VCP-202ENST00000417448 PCSK5Q92824 1860 aa17.5■□□□□ 0.39
VCP-202ENST00000417448 GOLGA8KD6RF30 607 aa17.49■□□□□ 0.39
VCP-202ENST00000417448 GOLGA8TH3BQL2 631 aa17.49■□□□□ 0.39
VCP-202ENST00000417448 KIF1CO43896 1103 aaKnown RBP17.49■□□□□ 0.39
VCP-202ENST00000417448 SNX2O60749 519 aa17.49■□□□□ 0.39
VCP-202ENST00000417448 GOT2P00505 430 aaKnown RBP17.49■□□□□ 0.39
VCP-202ENST00000417448 F7P08709 466 aaPredicted RBP17.49■□□□□ 0.39
VCP-202ENST00000417448 F3P13726 295 aa17.49■□□□□ 0.39
VCP-202ENST00000417448 TYRP1P17643 537 aa17.49■□□□□ 0.39
VCP-202ENST00000417448 PBLDP30039 288 aaPredicted RBP17.49■□□□□ 0.39
VCP-202ENST00000417448 UBE2IP63279 158 aaKnown RBP17.49■□□□□ 0.39
VCP-202ENST00000417448 CDK16Q00536 496 aa17.49■□□□□ 0.39
VCP-202ENST00000417448 SEMA3AQ14563 771 aa17.49■□□□□ 0.39
VCP-202ENST00000417448 FNBP1LQ5T0N5 605 aa17.49■□□□□ 0.39
VCP-202ENST00000417448 CASC4Q6P4E1 433 aa17.49■□□□□ 0.39
VCP-202ENST00000417448 TMEM220Q6QAJ8 160 aa17.49■□□□□ 0.39
VCP-202ENST00000417448 SNX20Q7Z614 316 aa17.49■□□□□ 0.39
VCP-202ENST00000417448 SERPINA9Q86WD7 417 aa17.49■□□□□ 0.39
VCP-202ENST00000417448 FDCSPQ8NFU4 85 aa17.49■□□□□ 0.39
VCP-202ENST00000417448 PNPLA2Q96AD5 504 aa17.49■□□□□ 0.39
VCP-202ENST00000417448 SNRNP40Q96DI7 357 aaKnown RBP17.49■□□□□ 0.39
VCP-202ENST00000417448 MFSD3Q96ES6 412 aa17.49■□□□□ 0.39
VCP-202ENST00000417448 SERPINB12Q96P63 405 aa17.49■□□□□ 0.39
VCP-202ENST00000417448 NUDT9Q9BW91 350 aa17.49■□□□□ 0.39
VCP-202ENST00000417448 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms