RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 CAPN1P07384 714 aa13.98□□□□□ -0.17
PAF1-202ENST00000416728 PRSS56P0CW18 603 aa13.98□□□□□ -0.17
PAF1-202ENST00000416728 AGXTP21549 392 aa13.98□□□□□ -0.17
PAF1-202ENST00000416728 GNLYP22749 145 aa13.98□□□□□ -0.17
PAF1-202ENST00000416728 CACNG1Q06432 222 aa13.98□□□□□ -0.17
PAF1-202ENST00000416728 BOP1Q14137 746 aaKnown RBP13.98□□□□□ -0.17
PAF1-202ENST00000416728 NCF4Q15080 339 aa13.98□□□□□ -0.17
PAF1-202ENST00000416728 PARP6Q2NL67 630 aa13.98□□□□□ -0.17
PAF1-202ENST00000416728 FAM69BQ5VUD6 431 aa13.98□□□□□ -0.17
PAF1-202ENST00000416728 AADACL2Q6P093 401 aa13.98□□□□□ -0.17
PAF1-202ENST00000416728 KLHDC8BQ8IXV7 354 aa13.98□□□□□ -0.17
PAF1-202ENST00000416728 GPR135Q8IZ08 494 aa13.98□□□□□ -0.17
PAF1-202ENST00000416728 ADGRF3Q8IZF5 1079 aa13.98□□□□□ -0.17
PAF1-202ENST00000416728 TMEM102Q8N9M5 508 aaPredicted RBP13.98□□□□□ -0.17
PAF1-202ENST00000416728 ALG3Q92685 438 aa13.98□□□□□ -0.17
PAF1-202ENST00000416728 N4BP2L2Q92802 583 aaPredicted RBP13.98□□□□□ -0.17
PAF1-202ENST00000416728 DPH2Q9BQC3 489 aaPredicted RBP13.98□□□□□ -0.17
PAF1-202ENST00000416728 LRRC40Q9H9A6 602 aa13.98□□□□□ -0.17
PAF1-202ENST00000416728 LRRC4CQ9HCJ2 640 aa13.98□□□□□ -0.17
PAF1-202ENST00000416728 PADI2Q9Y2J8 665 aa13.98□□□□□ -0.17
PAF1-202ENST00000416728 DUSP10Q9Y6W6 482 aa13.98□□□□□ -0.17
PAF1-202ENST00000416728 GOLGA6L9A6NEM1 432 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 ZNF185O15231 689 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 ZNF749O43361 778 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 DPM1O60762 260 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 SORBS2O94875 1100 aaKnown RBP13.97□□□□□ -0.17
PAF1-202ENST00000416728 AP2A2O94973 939 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 AGFG2O95081 481 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 HBQ1P09105 142 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 TPH1P17752 444 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 RRADP55042 308 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 POU6F1Q14863 301 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 DBN1Q16643 649 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 FHL5Q5TD97 284 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 KCTD11Q693B1 232 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 SPESP1Q6UW49 350 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 CDHR3Q6ZTQ4 885 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 MICALCLQ6ZW33 695 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 MED25Q71SY5 747 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 RAB43Q86YS6 212 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 PIANPQ8IYJ0 282 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 FAM71DQ8N9W8 422 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 TTC13Q8NBP0 860 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 FDCSPQ8NFU4 85 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 STYXQ8WUJ0 223 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 CDKN2AIPNLQ96HQ2 116 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 ALS2CR12Q96Q35 445 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 PANX2Q96RD6 677 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 DHRS4Q9BTZ2 278 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 SMARCAL1Q9NZC9 954 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 MAP4K5Q9Y4K4 846 aa13.97□□□□□ -0.17
PAF1-202ENST00000416728 A6NL46 340 aa13.96□□□□□ -0.17
PAF1-202ENST00000416728 BTNL10A8MVZ5 291 aa13.96□□□□□ -0.17
PAF1-202ENST00000416728 QSOX1O00391 747 aa13.96□□□□□ -0.17
PAF1-202ENST00000416728 LIN7AO14910 233 aaPredicted RBP13.96□□□□□ -0.17
PAF1-202ENST00000416728 METTL18O95568 372 aa13.96□□□□□ -0.17
PAF1-202ENST00000416728 SHMT2P34897 504 aa13.96□□□□□ -0.17
PAF1-202ENST00000416728 NSG1P42857 185 aa13.96□□□□□ -0.17
PAF1-202ENST00000416728 P3H1Q32P28 736 aa13.96□□□□□ -0.17
PAF1-202ENST00000416728 HPS6Q86YV9 775 aa13.96□□□□□ -0.17
PAF1-202ENST00000416728 TMTC1Q8IUR5 882 aa13.96□□□□□ -0.17
PAF1-202ENST00000416728 ZBTB2Q8N680 514 aa13.96□□□□□ -0.17
PAF1-202ENST00000416728 C19orf47Q8N9M1 422 aaKnown RBP13.96□□□□□ -0.17
PAF1-202ENST00000416728 OR5AR1Q8NGP9 310 aa13.96□□□□□ -0.17
PAF1-202ENST00000416728 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.96□□□□□ -0.172e-6■■■■■ 54.9
PAF1-202ENST00000416728 C17orf62Q9BQA9 187 aa13.96□□□□□ -0.17
PAF1-202ENST00000416728 NUDT9Q9BW91 350 aa13.96□□□□□ -0.17
PAF1-202ENST00000416728 SLAMF7Q9NQ25 335 aa13.96□□□□□ -0.17
PAF1-202ENST00000416728 GPR83Q9NYM4 423 aa13.96□□□□□ -0.17
PAF1-202ENST00000416728 ICKQ9UPZ9 632 aa13.96□□□□□ -0.17
PAF1-202ENST00000416728 ASF1AQ9Y294 204 aa13.96□□□□□ -0.17
PAF1-202ENST00000416728 GRID2IPA4D2P6 1211 aa13.96□□□□□ -0.18
PAF1-202ENST00000416728 OR2B3O76000 313 aa13.96□□□□□ -0.18
PAF1-202ENST00000416728 AP2A1O95782 977 aa13.96□□□□□ -0.18
PAF1-202ENST00000416728 FTH1P02794 183 aa13.96□□□□□ -0.18
PAF1-202ENST00000416728 UGT2B7P16662 529 aa13.96□□□□□ -0.18
PAF1-202ENST00000416728 ATP1A4Q13733 1029 aa13.96□□□□□ -0.18
PAF1-202ENST00000416728 ITIH4Q14624 930 aa13.96□□□□□ -0.18
PAF1-202ENST00000416728 INPP5JQ15735 1006 aaPredicted RBP13.96□□□□□ -0.18
PAF1-202ENST00000416728 JMJD6Q6NYC1 403 aaPredicted RBP13.96□□□□□ -0.18
PAF1-202ENST00000416728 UNC5AQ6ZN44 842 aa13.96□□□□□ -0.18
PAF1-202ENST00000416728 TRIM73Q86UV7 250 aa13.96□□□□□ -0.18
PAF1-202ENST00000416728 LRRC57Q8N9N7 239 aa13.96□□□□□ -0.18
PAF1-202ENST00000416728 GLIS1Q8NBF1 620 aa13.96□□□□□ -0.18
PAF1-202ENST00000416728 ELMO1Q92556 727 aa13.96□□□□□ -0.18
PAF1-202ENST00000416728 TCTN2Q96GX1 697 aa13.96□□□□□ -0.18
PAF1-202ENST00000416728 SGSM3Q96HU1 749 aa13.96□□□□□ -0.18
PAF1-202ENST00000416728 MFRPQ9BY79 579 aa13.96□□□□□ -0.18
PAF1-202ENST00000416728 LACRTQ9GZZ8 138 aa13.96□□□□□ -0.18
PAF1-202ENST00000416728 FAM60AQ9NP50 221 aa13.96□□□□□ -0.18
PAF1-202ENST00000416728 PIH1D1Q9NWS0 290 aaKnown RBP13.96□□□□□ -0.18
PAF1-202ENST00000416728 LUZP4Q9P127 313 aa13.96□□□□□ -0.18
PAF1-202ENST00000416728 POLG2Q9UHN1 485 aa13.96□□□□□ -0.18
PAF1-202ENST00000416728 AP1M2Q9Y6Q5 423 aa13.96□□□□□ -0.18
PAF1-202ENST00000416728 SPENQ96T58 3664 aaKnown RBP13.95□□□□□ -0.18
PAF1-202ENST00000416728 CCDC78A2IDD5 438 aa13.95□□□□□ -0.18
PAF1-202ENST00000416728 PSMD3O43242 534 aa13.95□□□□□ -0.18
PAF1-202ENST00000416728 MSNP26038 577 aaKnown RBP13.95□□□□□ -0.18
PAF1-202ENST00000416728 OTX2P32243 289 aa13.95□□□□□ -0.18
PAF1-202ENST00000416728 BRD3Q15059 726 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms