RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 NOMO3P69849 1222 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 INCA1Q0VD86 236 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 TUSC3Q13454 348 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 RPS6KA2Q15349 733 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 RAB30Q15771 203 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 LINC00696Q6ZRV3 163 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 ABI1Q8IZP0 508 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 CRIPAKQ8N1N5 446 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 SCAIQ8N9R8 606 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 HIPK4Q8NE63 616 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 CSGALNACT1Q8TDX6 532 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 CASD1Q96PB1 797 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 TMEM209Q96SK2 561 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 RTKNQ9BST9 563 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 SLC5A7Q9GZV3 580 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 SPACA1Q9HBV2 294 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 TMEM184CQ9NVA4 438 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 KLHL9Q9P2J3 617 aa9.24□□□□□ -0.93
SNHG3-201ENST00000413987 M0QYV0 167 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 FBP2O00757 339 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 HUS1O60921 280 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 CKMP06732 381 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 C8BP07358 591 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 CPT2P23786 658 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 TKTP29401 623 aaKnown RBP9.23□□□□□ -0.93
SNHG3-201ENST00000413987 CLCNKAP51800 687 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 TUBB3Q13509 450 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 DDX39BQ13838 428 aaKnown RBP9.23□□□□□ -0.93
SNHG3-201ENST00000413987 ZNF829Q3KNS6 432 aaPredicted RBP9.23□□□□□ -0.93
SNHG3-201ENST00000413987 ANKRD22Q5VYY1 191 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 ETFRF1Q6IPR1 90 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 SLC36A4Q6YBV0 504 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 PHF13Q86YI8 300 aaPredicted RBP9.23□□□□□ -0.93
SNHG3-201ENST00000413987 HPS6Q86YV9 775 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 SPARTQ8N0X7 666 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 LSMEM2Q8N112 164 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 TCAIMQ8N3R3 496 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 ZCCHC7Q8N3Z6 543 aaKnown RBP9.23□□□□□ -0.93
SNHG3-201ENST00000413987 DDHD1Q8NEL9 900 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 OR13C2Q8NGS9 318 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 HM13Q8TCT9 377 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 TSPEARQ8WU66 669 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 BADQ92934 168 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 PIWIL1Q96J94 861 aaKnown RBP9.23□□□□□ -0.93
SNHG3-201ENST00000413987 ACE2Q9BYF1 805 aaPredicted RBP9.23□□□□□ -0.93
SNHG3-201ENST00000413987 SLC2A11Q9BYW1 496 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 PALMDQ9NP74 551 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 MARCOQ9UEW3 520 aaPredicted RBP9.23□□□□□ -0.93
SNHG3-201ENST00000413987 TSPAN16Q9UKR8 245 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 FBXL21Q9UKT6 434 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 FUOMA2VDF0 154 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 SOBPA7XYQ1 873 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 AXIN1O15169 862 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 ASNA1O43681 348 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 NUDT21O43809 227 aaKnown RBP9.23□□□□□ -0.93
SNHG3-201ENST00000413987 H6PDO95479 791 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 TK1P04183 234 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 OR4Q2P0C623 313 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 OCM2P0CE71 109 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 OCMP0CE72 109 aaPredicted RBP9.23□□□□□ -0.93
SNHG3-201ENST00000413987 ELK3P41970 407 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 TMED10P49755 219 aaKnown RBP9.23□□□□□ -0.93
SNHG3-201ENST00000413987 RGS7P49802 495 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 ENTPD1P49961 510 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 ARSDP51689 593 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 BMXP51813 675 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 YWHAGP61981 247 aaKnown RBP eCLIP9.23□□□□□ -0.93
SNHG3-201ENST00000413987 UBE2IP63279 158 aaKnown RBP9.23□□□□□ -0.93
SNHG3-201ENST00000413987 ZNF124Q15973 351 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 BCL2A1Q16548 175 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 CCDC153Q494R4 210 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 TCHHL1Q5QJ38 904 aaPredicted RBP9.23□□□□□ -0.93
SNHG3-201ENST00000413987 C16orf89Q6UX73 402 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 CDHR3Q6ZTQ4 885 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 BTLAQ7Z6A9 289 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 TERB1Q8NA31 727 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 OR1N1Q8NGS0 311 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 PPP4R1Q8TF05 950 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 MRGPRX3Q96LB0 322 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 MNTQ99583 582 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 EBF4Q9BQW3 602 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 WDR83Q9BRX9 315 aaKnown RBP9.23□□□□□ -0.93
SNHG3-201ENST00000413987 MECRQ9BV79 373 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 C1QTNF2Q9BXJ5 285 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 ZDHHC5Q9C0B5 715 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 TM7SF3Q9NS93 570 aa9.23□□□□□ -0.93
SNHG3-201ENST00000413987 METTL12A8MUP2 240 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 PHGDHO43175 533 aaKnown RBP9.22□□□□□ -0.93
SNHG3-201ENST00000413987 BMP10O95393 424 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 EIF2S1P05198 315 aaKnown RBP9.22□□□□□ -0.93
SNHG3-201ENST00000413987 PFKMP08237 780 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 RPL22P35268 128 aaKnown RBP9.22□□□□□ -0.93
SNHG3-201ENST00000413987 PNPLA4P41247 253 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 GARSP41250 739 aaKnown RBP9.22□□□□□ -0.93
SNHG3-201ENST00000413987 CTSOP43234 321 aaPredicted RBP9.22□□□□□ -0.93
SNHG3-201ENST00000413987 SERPINB9P50453 376 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 BCAP31P51572 246 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 PHC1P78364 1004 aa9.22□□□□□ -0.93
SNHG3-201ENST00000413987 HTRA4P83105 476 aaPredicted RBP9.22□□□□□ -0.93
SNHG3-201ENST00000413987 TXNL4AP83876 142 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms