RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 CCDC3Q9BQI4 270 aa8.38□□□□□ -1.07
PBRM1-209ENST00000412587 AGO1Q9UL18 857 aaKnown RBP8.38□□□□□ -1.07
PBRM1-209ENST00000412587 H0YAE9 185 aa8.38□□□□□ -1.07
PBRM1-209ENST00000412587 ZBTB14O43829 449 aa8.38□□□□□ -1.07
PBRM1-209ENST00000412587 RSL1D1O76021 490 aaKnown RBP8.38□□□□□ -1.07
PBRM1-209ENST00000412587 NDST3O95803 873 aa8.38□□□□□ -1.07
PBRM1-209ENST00000412587 PRKCAP17252 672 aa8.38□□□□□ -1.07
PBRM1-209ENST00000412587 TLE2Q04725 743 aa8.38□□□□□ -1.07
PBRM1-209ENST00000412587 VARS2Q5ST30 1063 aaKnown RBP8.38□□□□□ -1.07
PBRM1-209ENST00000412587 RELL1Q8IUW5 271 aa8.38□□□□□ -1.07
PBRM1-209ENST00000412587 OR5T2Q8NGG2 359 aa8.38□□□□□ -1.07
PBRM1-209ENST00000412587 FBXO30Q8TB52 745 aa8.38□□□□□ -1.07
PBRM1-209ENST00000412587 METTL6Q8TCB7 284 aa8.38□□□□□ -1.07
PBRM1-209ENST00000412587 CXorf40AQ8TE69 158 aa8.38□□□□□ -1.07
PBRM1-209ENST00000412587 LRRN4Q8WUT4 740 aa8.38□□□□□ -1.07
PBRM1-209ENST00000412587 CANT1Q8WVQ1 401 aa8.38□□□□□ -1.07
PBRM1-209ENST00000412587 IPCEF1Q8WWN9 437 aaPredicted RBP8.38□□□□□ -1.07
PBRM1-209ENST00000412587 SMG7Q92540 1137 aaKnown RBP8.38□□□□□ -1.07
PBRM1-209ENST00000412587 NDRG1Q92597 394 aaKnown RBP8.38□□□□□ -1.07
PBRM1-209ENST00000412587 P2RY11Q96G91 374 aa8.38□□□□□ -1.07
PBRM1-209ENST00000412587 FEM1AQ9BSK4 669 aa8.38□□□□□ -1.07
PBRM1-209ENST00000412587 CAPN10Q9HC96 672 aa8.38□□□□□ -1.07
PBRM1-209ENST00000412587 RAD18Q9NS91 495 aa8.38□□□□□ -1.07
PBRM1-209ENST00000412587 CFAP97Q9P2B7 532 aa8.38□□□□□ -1.07
PBRM1-209ENST00000412587 GTF2IRD1Q9UHL9 959 aa8.38□□□□□ -1.07
PBRM1-209ENST00000412587 IKZF3Q9UKT9 509 aa8.38□□□□□ -1.07
PBRM1-209ENST00000412587 TOPAZ1Q8N9V7 1692 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 MYBPHLA2RUH7 354 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 KCNU1A8MYU2 1149 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 H7C0S8 307 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 KPNA5O15131 536 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 MDM4O15151 490 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 VPS4BO75351 444 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 CLDN11O75508 207 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 IL1BP01584 269 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 RPN2P04844 631 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 ITGA2P17301 1181 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 PVALBP20472 110 aaPredicted RBP8.37□□□□□ -1.07
PBRM1-209ENST00000412587 CD72P21854 359 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 GRIA4P48058 902 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 ZNF81P51508 661 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 PTPN5P54829 565 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 EMP3P54852 163 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 CLCQ05315 142 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 DAG1Q14118 895 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 GRB14Q14449 540 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 CHSY3Q70JA7 882 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 UXS1Q8NBZ7 420 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 NETO2Q8NC67 525 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 OR56A4Q8NGH8 313 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 ACDQ96AP0 544 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 ROPN1LQ96C74 230 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 CRELD1Q96HD1 420 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 PCED1BQ96HM7 432 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 CSPG4P5Q96PW8 444 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 PCDHAC1Q9H158 963 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 APOBEC3GQ9HC16 384 aaKnown RBP8.37□□□□□ -1.07
PBRM1-209ENST00000412587 MID1IP1Q9NPA3 183 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 PRMT8Q9NR22 394 aaPredicted RBP8.37□□□□□ -1.07
PBRM1-209ENST00000412587 PAK1IP1Q9NWT1 392 aaPredicted RBP8.37□□□□□ -1.07
PBRM1-209ENST00000412587 KCTD5Q9NXV2 234 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 AHSPQ9NZD4 102 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 SPEF2Q9C093 1822 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.37□□□□□ -1.07
PBRM1-209ENST00000412587 AGRPO00253 132 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 TULP3O75386 442 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 LRCH4O75427 683 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 MTA2O94776 668 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 RASGRP1O95267 797 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 FGF19O95750 216 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 CHRNA1P02708 482 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 PIRTP0C851 137 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 SLC2A4P14672 509 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 TYMPP19971 482 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 CTSKP43235 329 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 LEPRP48357 1165 aaKnown RBP8.37□□□□□ -1.07
PBRM1-209ENST00000412587 CDH13P55290 713 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 WNT3AP56704 352 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 SSTP61278 116 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 SNRPD2P62316 118 aaKnown RBP8.37□□□□□ -1.07
PBRM1-209ENST00000412587 PFKPQ01813 784 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 ELOAQ14241 798 aaKnown RBP8.37□□□□□ -1.07
PBRM1-209ENST00000412587 MED22Q15528 200 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 POM121L1PQ3SYA9 428 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 MON1BQ7L1V2 547 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 SLC44A2Q8IWA5 706 aaPredicted RBP8.37□□□□□ -1.07
PBRM1-209ENST00000412587 C7orf61Q8IZ16 206 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 CFAP52Q8N1V2 620 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 UBE2J2Q8N2K1 259 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 SVOPLQ8N434 492 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 ZFP90Q8TF47 636 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 TFAP2BQ92481 460 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 FAM120BQ96EK7 910 aaKnown RBP8.37□□□□□ -1.07
PBRM1-209ENST00000412587 SCLYQ96I15 445 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 PFDN5Q99471 154 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 MIR1-1HGQ9H1L0 117 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 RCOR3Q9P2K3 495 aaPredicted RBP8.37□□□□□ -1.07
PBRM1-209ENST00000412587 AASSQ9UDR5 926 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 PCDHB9Q9Y5E1 797 aa8.37□□□□□ -1.07
PBRM1-209ENST00000412587 BCAS1O75363 584 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms