RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 CD200R1Q8TD46 325 aa21.75■■□□□ 1.07
PTCD3-203ENST00000409783 IFT81Q8WYA0 676 aa21.75■■□□□ 1.07
PTCD3-203ENST00000409783 GPR21Q99679 349 aa21.75■■□□□ 1.07
PTCD3-203ENST00000409783 TRIT1Q9H3H1 467 aaKnown RBP21.75■■□□□ 1.07
PTCD3-203ENST00000409783 SATB2Q9UPW6 733 aa21.75■■□□□ 1.07
PTCD3-203ENST00000409783 NFS1Q9Y697 457 aa21.75■■□□□ 1.07
PTCD3-203ENST00000409783 OR5K3A6NET4 321 aa21.74■■□□□ 1.07
PTCD3-203ENST00000409783 FAM159BA6NKW6 160 aa21.74■■□□□ 1.07
PTCD3-203ENST00000409783 MPOP05164 745 aa21.74■■□□□ 1.07
PTCD3-203ENST00000409783 CD9P21926 228 aa21.74■■□□□ 1.07
PTCD3-203ENST00000409783 LSSP48449 732 aa21.74■■□□□ 1.07
PTCD3-203ENST00000409783 GRB7Q14451 532 aa21.74■■□□□ 1.07
PTCD3-203ENST00000409783 PLXDC1Q8IUK5 500 aa21.74■■□□□ 1.07
PTCD3-203ENST00000409783 RELL1Q8IUW5 271 aa21.74■■□□□ 1.07
PTCD3-203ENST00000409783 OR4E2Q8NGC2 313 aa21.74■■□□□ 1.07
PTCD3-203ENST00000409783 WDR36Q8NI36 951 aaKnown RBP21.74■■□□□ 1.07
PTCD3-203ENST00000409783 STRADBQ9C0K7 418 aa21.74■■□□□ 1.07
PTCD3-203ENST00000409783 TWSG1Q9GZX9 223 aa21.74■■□□□ 1.07
PTCD3-203ENST00000409783 POLR1BQ9H9Y6 1135 aa21.74■■□□□ 1.07
PTCD3-203ENST00000409783 ICKQ9UPZ9 632 aa21.74■■□□□ 1.07
PTCD3-203ENST00000409783 ASPMQ8IZT6 3477 aa21.74■■□□□ 1.07
PTCD3-203ENST00000409783 TPRP12270 2363 aaKnown RBP21.73■■□□□ 1.07
PTCD3-203ENST00000409783 HGSO14964 777 aaPredicted RBP21.73■■□□□ 1.07
PTCD3-203ENST00000409783 CAPN5O15484 640 aaPredicted RBP21.73■■□□□ 1.07
PTCD3-203ENST00000409783 MATN4O95460 622 aa21.73■■□□□ 1.07
PTCD3-203ENST00000409783 RHOXF2BP0C7M4 288 aa21.73■■□□□ 1.07
PTCD3-203ENST00000409783 PPM1FP49593 454 aaPredicted RBP21.73■■□□□ 1.07
PTCD3-203ENST00000409783 CDKN2DP55273 166 aa21.73■■□□□ 1.07
PTCD3-203ENST00000409783 EIF3IQ13347 325 aaKnown RBP21.73■■□□□ 1.07
PTCD3-203ENST00000409783 CUL1Q13616 776 aa21.73■■□□□ 1.07
PTCD3-203ENST00000409783 C3orf38Q5JPI3 329 aa21.73■■□□□ 1.07
PTCD3-203ENST00000409783 UBAP2Q5T6F2 1119 aaKnown RBP21.73■■□□□ 1.07
PTCD3-203ENST00000409783 RAB11FIP2Q7L804 512 aa21.73■■□□□ 1.07
PTCD3-203ENST00000409783 STRA8Q7Z7C7 330 aa21.73■■□□□ 1.07
PTCD3-203ENST00000409783 ZC3HC1Q86WB0 502 aaKnown RBP21.73■■□□□ 1.07
PTCD3-203ENST00000409783 LCN9Q8WX39 176 aa21.73■■□□□ 1.07
PTCD3-203ENST00000409783 INPP5DQ92835 1189 aa21.73■■□□□ 1.07
PTCD3-203ENST00000409783 NXPE2Q96DL1 559 aa21.73■■□□□ 1.07
PTCD3-203ENST00000409783 RHOXF2Q9BQY4 288 aa21.73■■□□□ 1.07
PTCD3-203ENST00000409783 MENTQ9BUN1 341 aa21.73■■□□□ 1.07
PTCD3-203ENST00000409783 DKK4Q9UBT3 224 aa21.73■■□□□ 1.07
PTCD3-203ENST00000409783 MTRF1LQ9UGC7 380 aaKnown RBP21.73■■□□□ 1.07
PTCD3-203ENST00000409783 POLG2Q9UHN1 485 aa21.73■■□□□ 1.07
PTCD3-203ENST00000409783 CORO1CQ9ULV4 474 aaPredicted RBP21.73■■□□□ 1.07
PTCD3-203ENST00000409783 RUVBL2Q9Y230 463 aaKnown RBP21.73■■□□□ 1.07
PTCD3-203ENST00000409783 PCDHGA8Q9Y5G5 932 aa21.73■■□□□ 1.07
PTCD3-203ENST00000409783 ADAMTS20P59510 1910 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 ACACBO00763 2458 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 WDFY3Q8IZQ1 3526 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 OR6C74A6NCV1 312 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 BTN3A3O00478 584 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 KIF1CO43896 1103 aaKnown RBP21.72■■□□□ 1.07
PTCD3-203ENST00000409783 VPS26AO75436 327 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 ANKRD34CP0C6C1 535 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 HGFP14210 728 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 GABREP78334 506 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 KLHL38Q2WGJ6 581 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 SNAP47Q5SQN1 464 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 KLHL35Q6PF15 583 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 IGF2-ASQ6U949 168 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 CYHR1Q6ZMK1 362 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 NEK10Q6ZWH5 1172 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 RASGRP3Q8IV61 690 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 CFAP61Q8NHU2 1237 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 MDM1Q8TC05 714 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 TGM7Q96PF1 710 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 FMO2Q99518 471 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 ZMYND15Q9H091 742 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 SRMSQ9H3Y6 488 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 XKR8Q9H6D3 395 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 HRASLS2Q9NWW9 162 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 NSMCE4AQ9NXX6 385 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 NINJ2Q9NZG7 142 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 SEMA5BQ9P283 1151 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 KLHL3Q9UH77 587 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 LOXL2Q9Y4K0 774 aa21.72■■□□□ 1.07
PTCD3-203ENST00000409783 IGF2RP11717 2491 aa21.71■■□□□ 1.07
PTCD3-203ENST00000409783 PLD2O14939 933 aa21.71■■□□□ 1.07
PTCD3-203ENST00000409783 DXOO77932 396 aaKnown RBP21.71■■□□□ 1.07
PTCD3-203ENST00000409783 C1orf105O95561 183 aa21.71■■□□□ 1.07
PTCD3-203ENST00000409783 FDXRP22570 491 aa21.71■■□□□ 1.07
PTCD3-203ENST00000409783 PGGT1BP53609 377 aa21.71■■□□□ 1.07
PTCD3-203ENST00000409783 CYP4F3Q08477 520 aa21.71■■□□□ 1.07
PTCD3-203ENST00000409783 KYNUQ16719 465 aa21.71■■□□□ 1.07
PTCD3-203ENST00000409783 TTLL9Q3SXZ7 439 aa21.71■■□□□ 1.07
PTCD3-203ENST00000409783 DNTTIP2Q5QJE6 756 aaKnown RBP21.71■■□□□ 1.07
PTCD3-203ENST00000409783 HECTD2Q5U5R9 776 aa21.71■■□□□ 1.07
PTCD3-203ENST00000409783 AMIGO1Q86WK6 493 aa21.71■■□□□ 1.07
PTCD3-203ENST00000409783 OOSP2Q86WS3 158 aa21.71■■□□□ 1.07
PTCD3-203ENST00000409783 DCUN1D3Q8IWE4 304 aa21.71■■□□□ 1.07
PTCD3-203ENST00000409783 IFT20Q8IY31 132 aa21.71■■□□□ 1.07
PTCD3-203ENST00000409783 ADGRF3Q8IZF5 1079 aa21.71■■□□□ 1.07
PTCD3-203ENST00000409783 FBXO39Q8N4B4 442 aa21.71■■□□□ 1.07
PTCD3-203ENST00000409783 FBF1Q8TES7 1133 aa21.71■■□□□ 1.07
PTCD3-203ENST00000409783 OLFM1Q99784 485 aa21.71■■□□□ 1.07
PTCD3-203ENST00000409783 TAS2R13Q9NYV9 303 aa21.71■■□□□ 1.07
PTCD3-203ENST00000409783 TSR3Q9UJK0 312 aaKnown RBP21.71■■□□□ 1.07
PTCD3-203ENST00000409783 PLAGL1Q9UM63 463 aa21.71■■□□□ 1.07
PTCD3-203ENST00000409783 TDRKHQ9Y2W6 561 aaKnown RBP21.71■■□□□ 1.07
PTCD3-203ENST00000409783 A8MU76 341 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms