RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 RGS10O43665 173 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 ANGPTL1O95841 491 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 LINC00271P0C7V0 271 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 PDGFRAP16234 1089 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 CD36P16671 472 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 ALOX12P18054 663 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 HDCP19113 662 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 ARNTP27540 789 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 SCNN1AP37088 669 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 PPP3CCP48454 512 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 CHRNB3Q05901 458 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 TARBP2Q15633 366 aaKnown RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 ZIK1Q3SY52 487 aaPredicted RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 SPANXN2Q5MJ10 180 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 KIAA0319Q5VV43 1072 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 MLIPQ5VWP3 458 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 SULT1C3Q6IMI6 304 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 CAPN13Q6MZZ7 669 aaPredicted RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 EFCAB12Q6NXP0 572 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 METTL2BQ6P1Q9 378 aaKnown RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 LAYNQ6UX15 382 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 LYPD8Q6UX82 237 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 SPATA19Q7Z5L4 167 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 RBM23Q86U06 439 aaKnown RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 CUZD1Q86UP6 607 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 CCDC117Q8IWD4 279 aaPredicted RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 KLHDC8BQ8IXV7 354 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 RDH10Q8IZV5 341 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 CRIPAKQ8N1N5 446 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 OR5B17Q8NGF7 314 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 OR5K1Q8NHB7 308 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 LRRC20Q8TCA0 184 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 SP7Q8TDD2 431 aaPredicted RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 DNAJA4Q8WW22 397 aaPredicted RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 L3HYPDHQ96EM0 354 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 MAGEB10Q96LZ2 347 aaPredicted RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 TM9SF2Q99805 663 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 SNRNP25Q9BV90 132 aaKnown RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 ITPAQ9BY32 194 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 BCO2Q9BYV7 579 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 GABARAPL1Q9H0R8 117 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 OSBPL2Q9H1P3 480 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 TMEM134Q9H6X4 195 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 RC3H2Q9HBD1 1191 aaKnown RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 TIGARQ9NQ88 270 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 AASDHPPTQ9NRN7 309 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 FAM49BQ9NUQ9 324 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 POLR3BQ9NW08 1133 aaPredicted RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 NOSIPQ9Y314 301 aaKnown RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 RWDD3Q9Y3V2 267 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 HES2Q9Y543 173 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 KRT87PA6NCN2 255 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 PRR23AA6NEV1 266 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 TMEM233B4DJY2 109 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 H3BQ06 376 aaPredicted RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 M0QZ92 97 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 PRMT5O14744 637 aaPredicted RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 IPO13O94829 963 aaKnown RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 AP2A1O95782 977 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 RBP1P09455 135 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 PRKACAP17612 351 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 CAPN3P20807 821 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 HRH2P25021 359 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 ASPAP45381 313 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 CBX5P45973 191 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 GATMP50440 423 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 RAB25P57735 213 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 S100A12P80511 92 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 NFKB2Q00653 900 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 RIN1Q13671 783 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 USP10Q14694 798 aaKnown RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 GRM3Q14832 879 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 UGT3A2Q3SY77 523 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 MTERF2Q49AM1 385 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 PITRM1Q5JRX3 1037 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 OTUD3Q5T2D3 398 aaPredicted RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 CYHR1Q6ZMK1 362 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 DPY19L3Q6ZPD9 716 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 KCNMB4Q86W47 210 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 HIPK1Q86Z02 1210 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 ZDHHC17Q8IUH5 632 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 DPP10Q8N608 796 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 ZMIZ2Q8NF64 920 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 KCTD4Q8WVF5 259 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 ISG20Q96AZ6 181 aaKnown RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 ZNF669Q96BR6 464 aaPredicted RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 GIMAP5Q96F15 307 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 FAM167AQ96KS9 214 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 GAD1Q99259 594 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 SDHCQ99643 169 aaPredicted RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 LRRC3Q9BY71 257 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 ROGDIQ9GZN7 287 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 REXO4Q9GZR2 422 aaKnown RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 MAGIXQ9H6Y5 334 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 SYNDIG1Q9H7V2 258 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 CAB39LQ9H9S4 337 aa10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 WDR6Q9NNW5 1121 aaKnown RBP10.44□□□□□ -0.74
NIF3L1-204ENST00000409357 ASAH2Q9NR71 780 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms