RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 CDSNQ15517 529 aa12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 NKAIN1Q4KMZ8 207 aa12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 IRAK1BP1Q5VVH5 260 aa12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 MTFR2Q6P444 385 aa12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 FAM151BQ6UXP7 276 aa12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 LINC00696Q6ZRV3 163 aa12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 DET1Q7L5Y6 550 aa12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 LILRA3Q8N6C8 439 aaPredicted RBP12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 NIPA2Q8N8Q9 360 aa12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 CCNYQ8ND76 341 aa12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 ACVR1CQ8NER5 493 aa12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 OR1N1Q8NGS0 311 aa12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 LCN9Q8WX39 176 aa12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 N4BP2L2Q92802 583 aaPredicted RBP12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 TADA1Q96BN2 335 aa12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 IMP4Q96G21 291 aaKnown RBP12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 BTBD6Q96KE9 485 aa12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 ERGIC2Q96RQ1 377 aa12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 LHPPQ9H008 270 aa12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 SPRTNQ9H040 489 aaPredicted RBP12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 MRPL47Q9HD33 250 aaKnown RBP12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 SLC22A11Q9NSA0 550 aa12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 ACSL5Q9ULC5 683 aa12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 HS3ST3B1Q9Y662 390 aa12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 COLEC10Q9Y6Z7 277 aa12.4□□□□□ -0.42
CHRNA1-203ENST00000409219 GAPDHSO14556 408 aaPredicted RBP12.4□□□□□ -0.43
CHRNA1-203ENST00000409219 ZSCAN9O15535 394 aaPredicted RBP12.4□□□□□ -0.43
CHRNA1-203ENST00000409219 UNC5CO95185 931 aa12.4□□□□□ -0.43
CHRNA1-203ENST00000409219 GZMAP12544 262 aa12.4□□□□□ -0.43
CHRNA1-203ENST00000409219 SPAM1P38567 509 aa12.4□□□□□ -0.43
CHRNA1-203ENST00000409219 MFAP5Q13361 173 aa12.4□□□□□ -0.43
CHRNA1-203ENST00000409219 KRT33BQ14525 404 aa12.4□□□□□ -0.43
CHRNA1-203ENST00000409219 NOMO1Q15155 1222 aa12.4□□□□□ -0.43
CHRNA1-203ENST00000409219 ASIC2Q16515 512 aa12.4□□□□□ -0.43
CHRNA1-203ENST00000409219 PPP2R5EQ16537 467 aa12.4□□□□□ -0.43
CHRNA1-203ENST00000409219 XKRXQ6PP77 449 aa12.4□□□□□ -0.43
CHRNA1-203ENST00000409219 C19orf47Q8N9M1 422 aaKnown RBP12.4□□□□□ -0.43
CHRNA1-203ENST00000409219 OR2L2Q8NH16 312 aa12.4□□□□□ -0.43
CHRNA1-203ENST00000409219 DTX3LQ8TDB6 740 aa12.4□□□□□ -0.43
CHRNA1-203ENST00000409219 NACC2Q96BF6 587 aa12.4□□□□□ -0.43
CHRNA1-203ENST00000409219 THOC3Q96J01 351 aaKnown RBP12.4□□□□□ -0.43
CHRNA1-203ENST00000409219 ZNF670Q9BS34 389 aa12.4□□□□□ -0.43
CHRNA1-203ENST00000409219 TRIM5Q9C035 493 aa12.4□□□□□ -0.43
CHRNA1-203ENST00000409219 TXLNGQ9NUQ3 528 aa12.4□□□□□ -0.43
CHRNA1-203ENST00000409219 CDC23Q9UJX2 597 aa12.4□□□□□ -0.43
CHRNA1-203ENST00000409219 SMTNL1A8MU46 457 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 DDX3XO00571 662 aaKnown RBP eCLIP12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 KLHL18O94889 574 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 NDST3O95803 873 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 CD1EP15812 388 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 MX2P20592 715 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 KIR3DL1P43629 444 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 TMPRSS15P98073 1019 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 UBXN1Q04323 297 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 TLE4Q04727 773 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 PPIDQ08752 370 aaKnown RBP12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 Q0VFX4 171 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 ZIC1Q15915 447 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 INAQ16352 499 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 LONRF2Q1L5Z9 754 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 TUBB8Q3ZCM7 444 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 ATP13A4Q4VNC1 1196 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 KIRREL2Q6UWL6 708 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 TMEM207Q6UWW9 146 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 ISLR2Q6UXK2 745 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 ZNF571Q7Z3V5 609 aaPredicted RBP12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 DAAM2Q86T65 1068 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 TRIM73Q86UV7 250 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 NT5DC3Q86UY8 548 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 ZNF655Q8N720 491 aaPredicted RBP12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 PQLC3Q8N755 202 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 OR52E1Q8NGJ3 308 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 SPATA22Q8NHS9 363 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 ENOX1Q8TC92 643 aaKnown RBP12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 SPSB2Q99619 263 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 HAUS4Q9H6D7 363 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 SMOXQ9NWM0 555 aa12.39□□□□□ -0.43
CHRNA1-203ENST00000409219 GLYATL1P3A0A0U1RQE8 302 aa12.38□□□□□ -0.43
CHRNA1-203ENST00000409219 C2orf74A8MZ97 194 aa12.38□□□□□ -0.43
CHRNA1-203ENST00000409219 NADKO95544 446 aaPredicted RBP12.38□□□□□ -0.43
CHRNA1-203ENST00000409219 POLBP06746 335 aa12.38□□□□□ -0.43
CHRNA1-203ENST00000409219 MYBL1P10243 752 aa12.38□□□□□ -0.43
CHRNA1-203ENST00000409219 ITGAXP20702 1163 aa12.38□□□□□ -0.43
CHRNA1-203ENST00000409219 AKT1P31749 480 aa12.38□□□□□ -0.43
CHRNA1-203ENST00000409219 GJC1P36383 396 aa12.38□□□□□ -0.43
CHRNA1-203ENST00000409219 SRSF11Q05519 484 aaKnown RBP12.38□□□□□ -0.43
CHRNA1-203ENST00000409219 SLC14A2Q15849 920 aa12.38□□□□□ -0.43
CHRNA1-203ENST00000409219 CT47A1Q5JQC4 288 aaPredicted RBP12.38□□□□□ -0.43
CHRNA1-203ENST00000409219 E4F1Q66K89 784 aaPredicted RBP12.38□□□□□ -0.43
CHRNA1-203ENST00000409219 SPESP1Q6UW49 350 aa12.38□□□□□ -0.43
CHRNA1-203ENST00000409219 CEP97Q8IW35 865 aa12.38□□□□□ -0.43
CHRNA1-203ENST00000409219 ADGRF3Q8IZF5 1079 aa12.38□□□□□ -0.43
CHRNA1-203ENST00000409219 FAF2Q96CS3 445 aa12.38□□□□□ -0.43
CHRNA1-203ENST00000409219 MTFMTQ96DP5 389 aaKnown RBP12.38□□□□□ -0.43
CHRNA1-203ENST00000409219 TRIM11Q96F44 468 aa12.38□□□□□ -0.43
CHRNA1-203ENST00000409219 SRPK1Q96SB4 655 aaKnown RBP12.38□□□□□ -0.43
CHRNA1-203ENST00000409219 SLC25A51Q9H1U9 297 aa12.38□□□□□ -0.43
CHRNA1-203ENST00000409219 MCCC2Q9HCC0 563 aa12.38□□□□□ -0.43
CHRNA1-203ENST00000409219 ACTR10Q9NZ32 417 aa12.38□□□□□ -0.43
CHRNA1-203ENST00000409219 IL17CQ9P0M4 197 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms