RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 RORAP35398 523 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 PREPP48147 710 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 ABRQ12979 859 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 PARP6Q2NL67 630 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 P3H1Q32P28 736 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 BCL7AQ4VC05 210 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 PRR30Q53SZ7 412 aaPredicted RBP11.99□□□□□ -0.49
PRAME-204ENST00000403441 PLEKHS1Q5SXH7 462 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 SLC6A19Q695T7 634 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 RAB43Q86YS6 212 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 SYTL1Q8IYJ3 562 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 ACVR1CQ8NER5 493 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 FDCSPQ8NFU4 85 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 SPDYE1Q8NFV5 336 aaPredicted RBP11.99□□□□□ -0.49
PRAME-204ENST00000403441 OR4E2Q8NGC2 313 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 ZNF398Q8TD17 642 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 LCN9Q8WX39 176 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 ATG4AQ8WYN0 398 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 PNPLA2Q96AD5 504 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 DCUN1D1Q96GG9 259 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 DPH2Q9BQC3 489 aaPredicted RBP11.99□□□□□ -0.49
PRAME-204ENST00000403441 TMEM121Q9BTD3 319 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 NUDT9Q9BW91 350 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 MFRPQ9BY79 579 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 SRMSQ9H3Y6 488 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 ACTR5Q9H9F9 607 aaPredicted RBP11.99□□□□□ -0.49
PRAME-204ENST00000403441 SERTAD3Q9UJW9 196 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 ZKSCAN5Q9Y2L8 839 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 SHANK1Q9Y566 2161 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 DOPEY1Q5JWR5 2465 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 CENPEQ02224 2701 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 NBPF19A0A087WUL8 3843 aa11.99□□□□□ -0.49
PRAME-204ENST00000403441 A1L4Q6 167 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 METTL18O95568 372 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 AGTP01019 485 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 POLBP06746 335 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 MSL3P1P0C860 447 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 PSMA3P25788 255 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 STIP1P31948 543 aaKnown RBP11.98□□□□□ -0.49
PRAME-204ENST00000403441 CA5AP35218 305 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 ITGA1P56199 1179 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 MRPL49Q13405 166 aaKnown RBP11.98□□□□□ -0.49
PRAME-204ENST00000403441 NCF4Q15080 339 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 CCNG2Q16589 344 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 PRAMEF17Q5VTA0 474 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 LCN10Q6JVE6 187 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 FBXO38Q6PIJ6 1188 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 FAM198BQ6UWH4 519 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 RASGEF1CQ8N431 466 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 FAM71DQ8N9W8 422 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 GLIS1Q8NBF1 620 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 PRR7Q8TB68 274 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 HM13Q8TCT9 377 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 SGSM3Q96HU1 749 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 LINC00615Q96LM1 132 aaPredicted RBP11.98□□□□□ -0.49
PRAME-204ENST00000403441 RMDN2Q96LZ7 410 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 PPM1MQ96MI6 270 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 FICDQ9BVA6 458 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 ASB8Q9H765 288 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 PCMTD2Q9NV79 361 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 FEZ2Q9UHY8 353 aaPredicted RBP11.98□□□□□ -0.49
PRAME-204ENST00000403441 CRLS1Q9UJA2 301 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 ARL5AQ9Y689 179 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 CREBBPQ92793 2442 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 MED13Q9UHV7 2174 aa11.98□□□□□ -0.49
PRAME-204ENST00000403441 HIVEP3Q5T1R4 2406 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 AGAP14A8MT82 685 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 CFAP99D6REC4 459 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 E7EQ34 232 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 IFRD1O00458 451 aaPredicted RBP11.97□□□□□ -0.49
PRAME-204ENST00000403441 SRP72O76094 671 aaKnown RBP11.97□□□□□ -0.49
PRAME-204ENST00000403441 AP2A1O95782 977 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 ALPPP05187 535 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 HBQ1P09105 142 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 AGXTP21549 392 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 OLIG2Q13516 323 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 ATP1A4Q13733 1029 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 PRPSAP1Q14558 356 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 TAF1AQ15573 450 aaPredicted RBP11.97□□□□□ -0.49
PRAME-204ENST00000403441 KYNUQ16719 465 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 EIF2S3LQ2VIR3 472 aaKnown RBP11.97□□□□□ -0.49
PRAME-204ENST00000403441 PTCHD3Q3KNS1 767 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 VWA5B1Q5TIE3 1220 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 FAM69BQ5VUD6 431 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 MAMDC2Q7Z304 686 aaPredicted RBP11.97□□□□□ -0.49
PRAME-204ENST00000403441 CFAP206Q8IYR0 622 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 GPR135Q8IZ08 494 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 IQCKQ8N0W5 287 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 Q8NA96 180 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 OR1L3Q8NH93 324 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 N4BP2L2Q92802 583 aaPredicted RBP11.97□□□□□ -0.49
PRAME-204ENST00000403441 ULK4Q96C45 1275 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 IP6K3Q96PC2 410 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 SMAD5Q99717 465 aaKnown RBP11.97□□□□□ -0.49
PRAME-204ENST00000403441 C17orf62Q9BQA9 187 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 DHRS4Q9BTZ2 278 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 PITPNM3Q9BZ71 974 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 VPS37BQ9H9H4 285 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 FKBPLQ9UIM3 349 aa11.97□□□□□ -0.49
PRAME-204ENST00000403441 TTC7AQ9ULT0 858 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms