RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 PSMC3P17980 439 aa17.5■□□□□ 0.39
CHTOP-205ENST00000403433 FASP25445 335 aa17.5■□□□□ 0.39
CHTOP-205ENST00000403433 HTR1EP28566 365 aa17.5■□□□□ 0.39
CHTOP-205ENST00000403433 OXTRP30559 389 aa17.5■□□□□ 0.39
CHTOP-205ENST00000403433 BMPR1AP36894 532 aa17.5■□□□□ 0.39
CHTOP-205ENST00000403433 KRT6CP48668 564 aa17.5■□□□□ 0.39
CHTOP-205ENST00000403433 DCDC1P59894 354 aa17.5■□□□□ 0.39
CHTOP-205ENST00000403433 HMGCS1Q01581 520 aa17.5■□□□□ 0.39
CHTOP-205ENST00000403433 SP140Q13342 867 aa17.5■□□□□ 0.39
CHTOP-205ENST00000403433 PLEKHS1Q5SXH7 462 aa17.5■□□□□ 0.39
CHTOP-205ENST00000403433 PROSER1Q86XN7 944 aa17.5■□□□□ 0.39
CHTOP-205ENST00000403433 MYLIPQ8WY64 445 aa17.5■□□□□ 0.39
CHTOP-205ENST00000403433 USP7Q93009 1102 aa17.5■□□□□ 0.39
CHTOP-205ENST00000403433 OTUB2Q96DC9 234 aa17.5■□□□□ 0.39
CHTOP-205ENST00000403433 FAM83DQ9H4H8 585 aa17.5■□□□□ 0.39
CHTOP-205ENST00000403433 AGPAT4Q9NRZ5 378 aa17.5■□□□□ 0.39
CHTOP-205ENST00000403433 C7orf72A4D263 438 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 UPK3BL1B0FP48 263 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 UPK3BL2E5RIL1 263 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 LEFTY1O75610 366 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 RSL1D1O76021 490 aaKnown RBP17.49■□□□□ 0.39
CHTOP-205ENST00000403433 SMIM18P0DKX4 95 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 NCK1P16333 377 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 HOXA9P31269 272 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 GGT5P36269 586 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 PEX19P40855 299 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 DGKQP52824 942 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 NTHL1P78549 312 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 PWP1Q13610 501 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 TMEM215Q68D42 235 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 DLEU7Q6UYE1 221 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 HSD11B1LQ7Z5J1 315 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 LIX1Q8N485 282 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 SLC13A3Q8WWT9 602 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 ARMC5Q96C12 935 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 PPM1MQ96MI6 270 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 RAD9AQ99638 391 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 SLC2A11Q9BYW1 496 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 DPY30Q9C005 99 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 ZFP14Q9HCL3 533 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 RAD18Q9NS91 495 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 MARK1Q9P0L2 795 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 CXXC1Q9P0U4 656 aaPredicted RBP17.49■□□□□ 0.39
CHTOP-205ENST00000403433 ANAPC2Q9UJX6 822 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 SAC3D1A6NKF1 404 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 TTC34A8MYJ7 566 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 SLC16A5O15375 505 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 TLL1O43897 1013 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 TPST1O60507 370 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 SEC22BO75396 215 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 ARHGEF15O94989 841 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 KCNH1O95259 989 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 UMPSP11172 480 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 CYP2A7P20853 494 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 XPAP23025 273 aaPredicted RBP17.49■□□□□ 0.39
CHTOP-205ENST00000403433 HNMTP50135 292 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 PRKCQQ04759 706 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 GK3PQ14409 553 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 PTGR1Q14914 329 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 ARSIQ5FYB1 569 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 KIAA0907Q7Z7F0 614 aaPredicted RBP17.49■□□□□ 0.39
CHTOP-205ENST00000403433 RGL4Q8IZJ4 473 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 PACRGLQ8N7B6 248 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 GLB1L3Q8NCI6 653 aaPredicted RBP17.49■□□□□ 0.39
CHTOP-205ENST00000403433 SP7Q8TDD2 431 aaPredicted RBP17.49■□□□□ 0.39
CHTOP-205ENST00000403433 FRS2Q8WU20 508 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 ASB11Q8WXH4 323 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 SORCS1Q8WY21 1168 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 CGREF1Q99674 301 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 SLC29A1Q99808 456 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 ZNF696Q9H7X3 374 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 PCDH12Q9NPG4 1184 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 ASIC5Q9NY37 505 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 MAGEL2Q9UJ55 1249 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 PCDHGB4Q9UN71 923 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 PCDHGB5Q9Y5G0 923 aa17.49■□□□□ 0.39
CHTOP-205ENST00000403433 NOTCH4Q99466 2003 aa17.48■□□□□ 0.39
CHTOP-205ENST00000403433 ZFC3H1O60293 1989 aaKnown RBP17.48■□□□□ 0.39
CHTOP-205ENST00000403433 TCRBV5S2A0A599 114 aa17.48■□□□□ 0.39
CHTOP-205ENST00000403433 TSPAN11A1L157 253 aa17.48■□□□□ 0.39
CHTOP-205ENST00000403433 SLC9A3R1O14745 358 aaPredicted RBP17.48■□□□□ 0.39
CHTOP-205ENST00000403433 MTX2O75431 263 aa17.48■□□□□ 0.39
CHTOP-205ENST00000403433 HNRNPA1P09651 372 aaKnown RBP eCLIP17.48■□□□□ 0.39
CHTOP-205ENST00000403433 CKMT2P17540 419 aa17.48■□□□□ 0.39
CHTOP-205ENST00000403433 SOX11P35716 441 aa17.48■□□□□ 0.39
CHTOP-205ENST00000403433 GRIA2P42262 883 aa17.48■□□□□ 0.39
CHTOP-205ENST00000403433 MYBPC1Q00872 1141 aa17.48■□□□□ 0.39
CHTOP-205ENST00000403433 CPSF6Q16630 551 aaKnown RBP eCLIP17.48■□□□□ 0.39
CHTOP-205ENST00000403433 PRSS36Q5K4E3 855 aa17.48■□□□□ 0.39
CHTOP-205ENST00000403433 INTS11Q5TA45 600 aaKnown RBP17.48■□□□□ 0.39
CHTOP-205ENST00000403433 PPP4R4Q6NUP7 873 aa17.48■□□□□ 0.39
CHTOP-205ENST00000403433 FBXO46Q6PJ61 603 aaPredicted RBP17.48■□□□□ 0.39
CHTOP-205ENST00000403433 VRK3Q8IV63 474 aa17.48■□□□□ 0.39
CHTOP-205ENST00000403433 CHERPQ8IWX8 916 aaKnown RBP17.48■□□□□ 0.39
CHTOP-205ENST00000403433 TRPV3Q8NET8 790 aa17.48■□□□□ 0.39
CHTOP-205ENST00000403433 MRGPRX3Q96LB0 322 aa17.48■□□□□ 0.39
CHTOP-205ENST00000403433 PIF1Q9H611 641 aa17.48■□□□□ 0.39
CHTOP-205ENST00000403433 C1orf109Q9NX04 203 aa17.48■□□□□ 0.39
CHTOP-205ENST00000403433 IL36AQ9UHA7 158 aa17.48■□□□□ 0.39
CHTOP-205ENST00000403433 ZNHIT2Q9UHR6 403 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms