RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 RASGRP3Q8IV61 690 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 TSPAN17Q96FV3 270 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 CNDP2Q96KP4 475 aaKnown RBP15.54■□□□□ 0.08
HMGA1-204ENST00000401473 FERD3LQ96RJ6 166 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 PPCSQ9HAB8 311 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 SYTL2Q9HCH5 934 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 DLL3Q9NYJ7 618 aa15.54■□□□□ 0.08
HMGA1-204ENST00000401473 A0A096LPK6 155 aa15.53■□□□□ 0.08
HMGA1-204ENST00000401473 IQANK1A0A1B0GTG1 560 aa15.53■□□□□ 0.08
HMGA1-204ENST00000401473 GFYI3L273 518 aa15.53■□□□□ 0.08
HMGA1-204ENST00000401473 EIF3FO00303 357 aaPredicted RBP15.53■□□□□ 0.08
HMGA1-204ENST00000401473 GIPC1O14908 333 aa15.53■□□□□ 0.08
HMGA1-204ENST00000401473 NUDT21O43809 227 aaKnown RBP15.53■□□□□ 0.08
HMGA1-204ENST00000401473 GLB1P16278 677 aa15.53■□□□□ 0.08
HMGA1-204ENST00000401473 CRABP2P29373 138 aa15.53■□□□□ 0.08
HMGA1-204ENST00000401473 CCSMST1Q4G0I0 132 aa15.53■□□□□ 0.08
HMGA1-204ENST00000401473 SH2D5Q6ZV89 423 aa15.53■□□□□ 0.08
HMGA1-204ENST00000401473 NEK10Q6ZWH5 1172 aa15.53■□□□□ 0.08
HMGA1-204ENST00000401473 SLC9B2Q86UD5 537 aa15.53■□□□□ 0.08
HMGA1-204ENST00000401473 CENPLQ8N0S6 344 aaPredicted RBP15.53■□□□□ 0.08
HMGA1-204ENST00000401473 PLD6Q8N2A8 252 aaKnown RBP15.53■□□□□ 0.08
HMGA1-204ENST00000401473 OR5K2Q8NHB8 316 aa15.53■□□□□ 0.08
HMGA1-204ENST00000401473 CXorf40BQ96DE9 158 aa15.53■□□□□ 0.08
HMGA1-204ENST00000401473 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.53■□□□□ 0.08
HMGA1-204ENST00000401473 ADAMTS6Q9UKP5 1117 aa15.53■□□□□ 0.08
HMGA1-204ENST00000401473 DCDC2BA2VCK2 349 aa15.52■□□□□ 0.08
HMGA1-204ENST00000401473 CPED1A4D0V7 1026 aa15.52■□□□□ 0.08
HMGA1-204ENST00000401473 PSIP1O75475 530 aaKnown RBP15.52■□□□□ 0.08
HMGA1-204ENST00000401473 C1orf105O95561 183 aa15.52■□□□□ 0.08
HMGA1-204ENST00000401473 TOP3BO95985 862 aaKnown RBP15.52■□□□□ 0.08
HMGA1-204ENST00000401473 VIPP01282 170 aa15.52■□□□□ 0.08
HMGA1-204ENST00000401473 SLC2A4P14672 509 aa15.52■□□□□ 0.08
HMGA1-204ENST00000401473 CKMT2P17540 419 aa15.52■□□□□ 0.08
HMGA1-204ENST00000401473 RGS4P49798 205 aa15.52■□□□□ 0.08
HMGA1-204ENST00000401473 SERPINB8P50452 374 aa15.52■□□□□ 0.08
HMGA1-204ENST00000401473 GPR18Q14330 331 aa15.52■□□□□ 0.08
HMGA1-204ENST00000401473 CSHL1Q14406 222 aa15.52■□□□□ 0.08
HMGA1-204ENST00000401473 GRB7Q14451 532 aa15.52■□□□□ 0.08
HMGA1-204ENST00000401473 NR0B2Q15466 257 aa15.52■□□□□ 0.08
HMGA1-204ENST00000401473 INAVAQ3KP66 663 aa15.52■□□□□ 0.08
HMGA1-204ENST00000401473 PERM1Q5SV97 790 aa15.52■□□□□ 0.08
HMGA1-204ENST00000401473 NKAPQ8N5F7 415 aaKnown RBP15.52■□□□□ 0.08
HMGA1-204ENST00000401473 MTBPQ96DY7 904 aa15.52■□□□□ 0.08
HMGA1-204ENST00000401473 POT1Q9NUX5 634 aa15.52■□□□□ 0.08
HMGA1-204ENST00000401473 ARGLU1Q9NWB6 273 aaPredicted RBP15.52■□□□□ 0.08
HMGA1-204ENST00000401473 CIDEBQ9UHD4 219 aa15.52■□□□□ 0.08
HMGA1-204ENST00000401473 ACOT9Q9Y305 439 aa15.52■□□□□ 0.08
HMGA1-204ENST00000401473 GOLGA8RI6L899 631 aa15.52■□□□□ 0.07
HMGA1-204ENST00000401473 CDC7O00311 574 aa15.52■□□□□ 0.07
HMGA1-204ENST00000401473 MPC1LP0DKB6 136 aa15.52■□□□□ 0.07
HMGA1-204ENST00000401473 KCNC1P48547 511 aa15.52■□□□□ 0.07
HMGA1-204ENST00000401473 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.52■□□□□ 0.07
HMGA1-204ENST00000401473 TAOK1Q7L7X3 1001 aa15.52■□□□□ 0.07
HMGA1-204ENST00000401473 TRIM48Q8IWZ4 208 aa15.52■□□□□ 0.07
HMGA1-204ENST00000401473 TBC1D21Q8IYX1 336 aa15.52■□□□□ 0.07
HMGA1-204ENST00000401473 KCTD4Q8WVF5 259 aa15.52■□□□□ 0.07
HMGA1-204ENST00000401473 JPH3Q8WXH2 748 aaPredicted RBP15.52■□□□□ 0.07
HMGA1-204ENST00000401473 NXNL1Q96CM4 212 aa15.52■□□□□ 0.07
HMGA1-204ENST00000401473 IGSF5Q9NSI5 407 aa15.52■□□□□ 0.07
HMGA1-204ENST00000401473 ZNF358Q9NW07 568 aa15.52■□□□□ 0.07
HMGA1-204ENST00000401473 FTSJ1Q9UET6 329 aa15.52■□□□□ 0.07
HMGA1-204ENST00000401473 COLEC10Q9Y6Z7 277 aa15.52■□□□□ 0.07
HMGA1-204ENST00000401473 ARHGEF33A8MVX0 844 aa15.51■□□□□ 0.07
HMGA1-204ENST00000401473 ZBTB14O43829 449 aa15.51■□□□□ 0.07
HMGA1-204ENST00000401473 CD1DP15813 335 aa15.51■□□□□ 0.07
HMGA1-204ENST00000401473 CSRP1P21291 193 aaKnown RBP15.51■□□□□ 0.07
HMGA1-204ENST00000401473 RPIAP49247 311 aa15.51■□□□□ 0.07
HMGA1-204ENST00000401473 DAB2P98082 770 aa15.51■□□□□ 0.07
HMGA1-204ENST00000401473 TRIP6Q15654 476 aaKnown RBP15.51■□□□□ 0.07
HMGA1-204ENST00000401473 CEP85LQ5SZL2 805 aa15.51■□□□□ 0.07
HMGA1-204ENST00000401473 UNC5DQ6UXZ4 953 aa15.51■□□□□ 0.07
HMGA1-204ENST00000401473 TMEM26Q6ZUK4 368 aa15.51■□□□□ 0.07
HMGA1-204ENST00000401473 ZNF438Q7Z4V0 828 aa15.51■□□□□ 0.07
HMGA1-204ENST00000401473 MYO1HQ8N1T3 1032 aa15.51■□□□□ 0.07
HMGA1-204ENST00000401473 GPR78Q96P69 363 aa15.51■□□□□ 0.07
HMGA1-204ENST00000401473 HGH1Q9BTY7 390 aa15.51■□□□□ 0.07
HMGA1-204ENST00000401473 MENTQ9BUN1 341 aa15.51■□□□□ 0.07
HMGA1-204ENST00000401473 TBC1D10AQ9BXI6 508 aa15.51■□□□□ 0.07
HMGA1-204ENST00000401473 DERL2Q9GZP9 239 aa15.51■□□□□ 0.07
HMGA1-204ENST00000401473 VPS11Q9H270 941 aa15.51■□□□□ 0.07
HMGA1-204ENST00000401473 KIR3DX1Q9H7L2 352 aa15.51■□□□□ 0.07
HMGA1-204ENST00000401473 MVB12BQ9H7P6 319 aa15.51■□□□□ 0.07
HMGA1-204ENST00000401473 TOR4AQ9NXH8 423 aa15.51■□□□□ 0.07
HMGA1-204ENST00000401473 LGALS13Q9UHV8 139 aa15.51■□□□□ 0.07
HMGA1-204ENST00000401473 TLK1Q9UKI8 766 aa15.51■□□□□ 0.07
HMGA1-204ENST00000401473 HEBP2Q9Y5Z4 205 aa15.51■□□□□ 0.07
HMGA1-204ENST00000401473 SNRNP200O75643 2136 aaKnown RBP15.51■□□□□ 0.07
HMGA1-204ENST00000401473 AGPSO00116 658 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 B4GAT1O43505 415 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 ACP1P24666 158 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 BDKRB1P46663 353 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 KRT33BQ14525 404 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 PHKG1Q16816 387 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 KRT71Q3SY84 523 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 SBSNQ6UWP8 590 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 LRIG3Q6UXM1 1119 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 ISCA2Q86U28 154 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 LMNTD1Q8N9Z9 388 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 CCDC74AQ96AQ1 378 aa15.5■□□□□ 0.07
HMGA1-204ENST00000401473 PTERQ96BW5 349 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms