RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 ARHGEF33A8MVX0 844 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 EIF3FO00303 357 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 IFRD1O00458 451 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 RFPL3O75679 317 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 C1orf105O95561 183 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 GP1BAP07359 652 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 INHBAP08476 426 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 FTH1P19P0C7X4 201 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SLC35E2BP0CK96 405 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 MPC1LP0DKB6 136 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CBSLP0DN79 551 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ENO3P13929 434 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CSF2RBP32927 897 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CBSP35520 551 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SKIV2L2P42285 1042 aaKnown RBP12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 MSH2P43246 934 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 DUSP3P51452 185 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CLDN6P56747 220 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 OR1D5P58170 312 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CCL7P80098 99 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SIM1P81133 766 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ILF2Q12905 390 aaKnown RBP12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 DLG1Q12959 904 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PRKG2Q13237 762 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PDAP1Q13442 181 aaKnown RBP12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 TTLL9Q3SXZ7 439 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 BEND6Q5SZJ8 279 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 UGT3A1Q6NUS8 523 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 UNC5DQ6UXZ4 953 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 TMPRSS9Q7Z410 1059 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 TRIM48Q8IWZ4 208 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 LMNTD1Q8N9Z9 388 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 OR6C4Q8NGE1 309 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 OR5K2Q8NHB8 316 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 EPS8L3Q8TE67 593 aaKnown RBP12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ASB11Q8WXH4 323 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 FERD3LQ96RJ6 166 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 TMEM121BQ9BXQ6 578 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CIDEBQ9UHD4 219 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ADAMTS6Q9UKP5 1117 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ASF1AQ9Y294 204 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PCDHGA1Q9Y5H4 931 aa12.08□□□□□ -0.48
HLA-DQB1-203ENST00000399082 FOXO6A8MYZ6 492 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 TRIM49D1C9J1S8 452 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 GFYI3L273 518 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 NTN3O00634 580 aaPredicted RBP12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PSIP1O75475 530 aaKnown RBP12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 TCEA3O75764 348 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 STMN1P16949 149 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SDHBP21912 280 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CD1CP29017 333 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 GPR3P46089 330 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SERPINB9P50453 376 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 RAB10P61026 200 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 IRF9Q00978 393 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PPM1JQ5JR12 505 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 TDRPQ86YL5 185 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 RBM12BQ8IXT5 1001 aaKnown RBP12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 TBC1D21Q8IYX1 336 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CENPLQ8N0S6 344 aaPredicted RBP12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CYP4X1Q8N118 509 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SPATA6LQ8N4H0 392 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 Q8N9G6 341 aaPredicted RBP12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 AVL9Q8NBF6 648 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 OR52E1Q8NGJ3 308 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CFAP61Q8NHU2 1237 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 DENND1AQ8TEH3 1009 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 RSC1A1Q92681 617 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PDLIM5Q96HC4 596 aaKnown RBP12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 UBXN10Q96LJ8 280 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 UNKQ9C0B0 810 aaKnown RBP12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 XKR8Q9H6D3 395 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 MVB12BQ9H7P6 319 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 GPAMQ9HCL2 828 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SNX15Q9NRS6 342 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PLAGL1Q9UM63 463 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ICKQ9UPZ9 632 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 HEBP2Q9Y5Z4 205 aa12.07□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CDC7O00311 574 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 OPA1O60313 960 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 RFPL1O75677 317 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 RPLP0P05388 317 aaKnown RBP12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 C2P06681 752 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 NDUFS1P28331 727 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ALDH4A1P30038 563 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SLCO1A2P46721 670 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PDX1P52945 283 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 EPHA4P54764 986 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 IL2P60568 153 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 INSM1Q01101 510 aaPredicted RBP12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 ILKQ13418 452 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PHKG1Q16816 387 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 PPP1R3AQ16821 1122 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CCDC157Q569K6 752 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 CDCP2Q5VXM1 449 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 NKAIN2Q5VXU1 208 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 DHRS13Q6UX07 377 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 DCUN1D3Q8IWE4 304 aa12.06□□□□□ -0.48
HLA-DQB1-203ENST00000399082 SKA2Q8WVK7 121 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms