RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 RFLNAQ6ZTI6 216 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ZNF786Q8N393 782 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 DPP10Q8N608 796 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 PACRGLQ8N7B6 248 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 RHBDF1Q96CC6 855 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 MTFMTQ96DP5 389 aaKnown RBP17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 HAUS8Q9BT25 410 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 CD244Q9BZW8 370 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 MUC13Q9H3R2 512 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ATP13A3Q9H7F0 1226 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 COL4A6Q14031 1691 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ZNF23P17027 643 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 SPAM1P38567 509 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ARHGEF7Q14155 803 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 LRRC73Q5JTD7 316 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 DTWD1Q8N5C7 304 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 MAGEE2Q8TD90 523 aaPredicted RBP17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 VPS50Q96JG6 964 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 CGREF1Q99674 301 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 CHID1Q9BWS9 393 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 CLK4Q9HAZ1 481 aaKnown RBP17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ZNHIT2Q9UHR6 403 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 LSM7Q9UK45 103 aaKnown RBP17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 FAM32AQ9Y421 112 aaKnown RBP17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 CEPT1Q9Y6K0 416 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 SCN8AQ9UQD0 1980 aa17.98■□□□□ 0.47
CHRFAM7A-202ENST00000397827 LOC730098B7Z3J9 87 aa17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ADAM23O75077 832 aa17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 RASAL1O95294 804 aa17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 GNRH1P01148 92 aa17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 PLEKHG6Q3KR16 790 aa17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 TMTC4Q5T4D3 741 aa17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 SPRED1Q7Z699 444 aa17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 OFCC1Q8IZS5 231 aa17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 NXPE1Q8N323 547 aa17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 VWCEQ96DN2 955 aa17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 LIN28AQ9H9Z2 209 aaKnown RBP17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 VAPAQ9P0L0 249 aa17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 DOCK6Q96HP0 2047 aa17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 DFNA5O60443 496 aa17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 TLE2Q04725 743 aa17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 CRTC1Q6UUV9 634 aa17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 FAM217AQ8IXS0 508 aa17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 TBC1D21Q8IYX1 336 aa17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 NSMCE2Q96MF7 247 aa17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 CFHR5Q9BXR6 569 aa17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 NEUROG3Q9Y4Z2 214 aa17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 TRIM17Q9Y577 477 aa17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 OBSL1O75147 1896 aa17.97■□□□□ 0.47
CHRFAM7A-202ENST00000397827 IGSF6O95976 241 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 NPPAP01160 153 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 PCNAP12004 261 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 FCGR1AP12314 374 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 CDH2P19022 906 aaPredicted RBP17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ENTPD1P49961 510 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 DEFB103AP81534 67 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 FAM174BQ3ZCQ3 159 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 SLC36A3Q495N2 470 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 LRRC66Q68CR7 880 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 TTC33Q6PID6 262 aaPredicted RBP17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 TBPL2Q6SJ96 375 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 CMTM8Q8IZV2 173 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 OR2AP1Q8NGE2 309 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 CLHC1Q8NHS4 586 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 VOPP1Q96AW1 172 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 PPP3R2Q96LZ3 170 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 HTATIP2Q9BUP3 242 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 SEZ6LQ9BYH1 1024 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 TRPV5Q9NQA5 729 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ABCB8Q9NUT2 735 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ZNF490Q9ULM2 529 aaPredicted RBP17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ARNTLO00327 626 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 SOCS5O75159 536 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ULK1O75385 1050 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 LDLRP01130 860 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 JAK1P23458 1154 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 SERPINA4P29622 427 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 KIAA0040Q15053 153 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 CLPPQ16740 277 aaPredicted RBP17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 TRIM60Q495X7 471 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 MACC1Q6ZN28 852 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 PROSER1Q86XN7 944 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ALDH16A1Q8IZ83 802 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 KRTCAP2Q8N6L1 136 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 PAPD5Q8NDF8 572 aaKnown RBP17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 ASIC4Q96FT7 647 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 HERC2P3Q9BVR0 1158 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 PLGRKTQ9HBL7 147 aa17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 GPBP1L1Q9HC44 474 aaPredicted RBP17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 MBD1Q9UIS9 605 aaPredicted RBP17.96■□□□□ 0.47
CHRFAM7A-202ENST00000397827 K7EPI3 171 aa17.96■□□□□ 0.46
CHRFAM7A-202ENST00000397827 OXSR1O95747 527 aaPredicted RBP17.96■□□□□ 0.46
CHRFAM7A-202ENST00000397827 UMPSP11172 480 aa17.96■□□□□ 0.46
CHRFAM7A-202ENST00000397827 MYF6P23409 242 aa17.96■□□□□ 0.46
CHRFAM7A-202ENST00000397827 PWP1Q13610 501 aa17.96■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SULT1C3Q6IMI6 304 aa17.96■□□□□ 0.46
CHRFAM7A-202ENST00000397827 MRPS31Q92665 395 aaKnown RBP17.96■□□□□ 0.46
CHRFAM7A-202ENST00000397827 SLC8A2Q9UPR5 921 aa17.96■□□□□ 0.46
CHRFAM7A-202ENST00000397827 PCDHB3Q9Y5E6 796 aa17.96■□□□□ 0.46
CHRFAM7A-202ENST00000397827 A0A1W2PRU2 124 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms