RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 MYBPHLA2RUH7 354 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 ZNF197O14709 1029 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 TSPAN3O60637 253 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 C9P02748 559 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 CD1DP15813 335 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 PTGER3P43115 390 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 C1QTNF8P60827 252 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 DGKZQ13574 1117 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 FAAH2Q6GMR7 532 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 OVOS1Q6IE37 1185 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 CCSAPQ6IQ19 270 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-205ENST00000397611 SLC2A7Q6PXP3 512 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 PLET1Q6UQ28 207 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 OR6J1Q8NGC5 347 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 MTFMTQ96DP5 389 aaKnown RBP5.36□□□□□ -1.55
PTPRD-205ENST00000397611 DIRAS2Q96HU8 199 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 DPEP3Q9H4B8 488 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 POLR3BQ9NW08 1133 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-205ENST00000397611 COQ3Q9NZJ6 369 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 NUDT4Q9NZJ9 180 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 DNAJB9Q9UBS3 223 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 FAM72CH0Y354 149 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 BTN3A1O00481 513 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 ZW10O43264 779 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 RAMP2O60895 175 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 MZF1P28698 734 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-205ENST00000397611 ATXN1P54253 815 aaKnown RBP5.36□□□□□ -1.55
PTPRD-205ENST00000397611 ARSFP54793 590 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 CTBP1Q13363 440 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 SYTL3Q4VX76 610 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 FAM72AQ5TYM5 149 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 CLEC6AQ6EIG7 209 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 FAM72DQ6L9T8 149 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 ERICH5Q6P6B1 374 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 HFE2Q6ZVN8 426 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 MILR1Q7Z6M3 343 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 FAM72BQ86X60 149 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 SOBPA7XYQ1 873 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 LDB2O43679 373 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 PKMP14618 531 aaKnown RBP5.36□□□□□ -1.55
PTPRD-205ENST00000397611 SMPD1P17405 629 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 RPS3P23396 243 aaKnown RBP eCLIP5.36□□□□□ -1.55
PTPRD-205ENST00000397611 IGFBP5P24593 272 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 GSTM5P46439 218 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 RXRGP48443 463 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 CDH13P55290 713 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 CYP2A13Q16696 494 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 PHKG1Q16816 387 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 AFTPHQ6ULP2 937 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 GET4Q7L5D6 327 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-205ENST00000397611 TMEM132CQ8N3T6 1108 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 SMG8Q8ND04 991 aaKnown RBP5.36□□□□□ -1.55
PTPRD-205ENST00000397611 LRRC58Q96CX6 371 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 GAD1Q99259 594 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 MFHAS1Q9Y4C4 1052 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 SYN3O14994 580 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 ARPC2O15144 300 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 PSIP1O75475 530 aaKnown RBP5.36□□□□□ -1.55
PTPRD-205ENST00000397611 SLC22A3O75751 556 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 LATS1O95835 1130 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 JUNP05412 331 aaKnown RBP5.36□□□□□ -1.55
PTPRD-205ENST00000397611 ZDHHC11BP0C7U3 371 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 SPATA31D3P0C874 917 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 GNG2P59768 71 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 KANK2Q63ZY3 851 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 SPATA31D4Q6ZUB0 917 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 HDAC10Q969S8 669 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 TMEM125Q96AQ2 219 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 CRISPLD1Q9H336 500 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 ALG2Q9H553 416 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 MAGIXQ9H6Y5 334 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 SMOXQ9NWM0 555 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 OAZ3Q9UMX2 235 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 PCDHB8Q9UN66 801 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 MAN2B2Q9Y2E5 1009 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 MRPS7Q9Y2R9 242 aaKnown RBP5.36□□□□□ -1.55
PTPRD-205ENST00000397611 CRYL1Q9Y2S2 319 aa5.36□□□□□ -1.55
PTPRD-205ENST00000397611 DLGAP1O14490 977 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 DUSP11O75319 330 aaKnown RBP5.35□□□□□ -1.55
PTPRD-205ENST00000397611 PAGE1O75459 146 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 SORBS2O94875 1100 aaKnown RBP5.35□□□□□ -1.55
PTPRD-205ENST00000397611 AP2A2O94973 939 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 PRPS2P11908 318 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 CAPN3P20807 821 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 ADCYAP1R1P41586 468 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 MAGEA2P43356 314 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 MAPK12P53778 367 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 IRF9Q00978 393 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 ABHD18Q0P651 414 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 MFSD10Q14728 455 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 C6orf136Q5SQH8 315 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 LCN1P1Q5VSP4 162 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 ERAP2Q6P179 960 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 CYP2U1Q7Z449 544 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 DENND6AQ8IWF6 608 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 PGBD3Q8N328 593 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 PDP1Q9P0J1 537 aaPredicted RBP5.35□□□□□ -1.55
PTPRD-205ENST00000397611 PFDN2Q9UHV9 154 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 ENOPH1Q9UHY7 261 aa5.35□□□□□ -1.55
PTPRD-205ENST00000397611 SCML2Q9UQR0 700 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms