RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 TEDDM1Q5T9Z0 273 aa24.67■■□□□ 1.54
TSPAN4-207ENST00000397411 TRMT10BQ6PF06 316 aaKnown RBP24.67■■□□□ 1.54
TSPAN4-207ENST00000397411 AMIGO1Q86WK6 493 aa24.67■■□□□ 1.54
TSPAN4-207ENST00000397411 FAM129CQ86XR2 697 aa24.67■■□□□ 1.54
TSPAN4-207ENST00000397411 OR52E1Q8NGJ3 308 aa24.67■■□□□ 1.54
TSPAN4-207ENST00000397411 OR5K2Q8NHB8 316 aa24.67■■□□□ 1.54
TSPAN4-207ENST00000397411 IFT81Q8WYA0 676 aa24.67■■□□□ 1.54
TSPAN4-207ENST00000397411 ZNF578Q96N58 590 aaPredicted RBP24.67■■□□□ 1.54
TSPAN4-207ENST00000397411 RAB33BQ9H082 229 aa24.67■■□□□ 1.54
TSPAN4-207ENST00000397411 EPHA6Q9UF33 1036 aa24.67■■□□□ 1.54
TSPAN4-207ENST00000397411 TPRP12270 2363 aaKnown RBP24.67■■□□□ 1.54
TSPAN4-207ENST00000397411 SPEGQ15772 3267 aa24.67■■□□□ 1.54
TSPAN4-207ENST00000397411 MN1Q10571 1320 aaPredicted RBP24.66■■□□□ 1.54
TSPAN4-207ENST00000397411 PMS2P1A4D2B8 440 aa24.66■■□□□ 1.54
TSPAN4-207ENST00000397411 OR5K3A6NET4 321 aa24.66■■□□□ 1.54
TSPAN4-207ENST00000397411 EFCAB7A8K855 629 aa24.66■■□□□ 1.54
TSPAN4-207ENST00000397411 VPS26AO75436 327 aa24.66■■□□□ 1.54
TSPAN4-207ENST00000397411 C9P02748 559 aa24.66■■□□□ 1.54
TSPAN4-207ENST00000397411 POLR2CP19387 275 aaPredicted RBP24.66■■□□□ 1.54
TSPAN4-207ENST00000397411 MLLT3P42568 568 aaPredicted RBP24.66■■□□□ 1.54
TSPAN4-207ENST00000397411 CBLBQ13191 982 aa24.66■■□□□ 1.54
TSPAN4-207ENST00000397411 FRG1Q14331 258 aaKnown RBP24.66■■□□□ 1.54
TSPAN4-207ENST00000397411 TMEM164Q5U3C3 297 aa24.66■■□□□ 1.54
TSPAN4-207ENST00000397411 UGT3A1Q6NUS8 523 aa24.66■■□□□ 1.54
TSPAN4-207ENST00000397411 ZNF549Q6P9A3 640 aa24.66■■□□□ 1.54
TSPAN4-207ENST00000397411 UNC5DQ6UXZ4 953 aa24.66■■□□□ 1.54
TSPAN4-207ENST00000397411 ARHGAP22Q7Z5H3 698 aa24.66■■□□□ 1.54
TSPAN4-207ENST00000397411 INPP5DQ92835 1189 aa24.66■■□□□ 1.54
TSPAN4-207ENST00000397411 AARSD1Q9BTE6 412 aaKnown RBP24.66■■□□□ 1.54
TSPAN4-207ENST00000397411 XKR8Q9H6D3 395 aa24.66■■□□□ 1.54
TSPAN4-207ENST00000397411 PLAC1Q9HBJ0 212 aa24.66■■□□□ 1.54
TSPAN4-207ENST00000397411 LATS2Q9NRM7 1088 aa24.66■■□□□ 1.54
TSPAN4-207ENST00000397411 GALPQ9UBC7 116 aa24.66■■□□□ 1.54
TSPAN4-207ENST00000397411 GSAPA4D1B5 854 aa24.65■■□□□ 1.54
TSPAN4-207ENST00000397411 AHSGP02765 367 aa24.65■■□□□ 1.54
TSPAN4-207ENST00000397411 ITIH1P19827 911 aa24.65■■□□□ 1.54
TSPAN4-207ENST00000397411 ARL4DP49703 201 aa24.65■■□□□ 1.54
TSPAN4-207ENST00000397411 SEPHS1P49903 392 aa24.65■■□□□ 1.54
TSPAN4-207ENST00000397411 ERVPABLB-1P60509 514 aa24.65■■□□□ 1.54
TSPAN4-207ENST00000397411 ST3GAL2Q16842 350 aa24.65■■□□□ 1.54
TSPAN4-207ENST00000397411 TBC1D25Q3MII6 688 aa24.65■■□□□ 1.54
TSPAN4-207ENST00000397411 ZDHHC24Q6UX98 284 aa24.65■■□□□ 1.54
TSPAN4-207ENST00000397411 CNTN4Q8IWV2 1026 aa24.65■■□□□ 1.54
TSPAN4-207ENST00000397411 SIDT2Q8NBJ9 832 aaKnown RBP24.65■■□□□ 1.54
TSPAN4-207ENST00000397411 KCNJ9Q92806 393 aa24.65■■□□□ 1.54
TSPAN4-207ENST00000397411 FGF11Q92914 225 aa24.65■■□□□ 1.54
TSPAN4-207ENST00000397411 PRR11Q96HE9 360 aaPredicted RBP24.65■■□□□ 1.54
TSPAN4-207ENST00000397411 MTRF1LQ9UGC7 380 aaKnown RBP24.65■■□□□ 1.54
TSPAN4-207ENST00000397411 AKAP13Q12802 2813 aa24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 TOX3O15405 576 aaPredicted RBP24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 DXOO77932 396 aaKnown RBP24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 ITGA2BP08514 1039 aa24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 CCL4P13236 92 aa24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 SSTR1P30872 391 aa24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 SHMT2P34897 504 aa24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 MAGEA4P43358 317 aa24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 ACSBG2Q5FVE4 666 aa24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 CEP128Q6ZU80 1094 aa24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 C3orf62Q6ZUJ4 267 aa24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 CDKL2Q92772 493 aa24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 USP7Q93009 1102 aa24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 CD180Q99467 661 aa24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 NDNQ99608 321 aa24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 GPR21Q99679 349 aa24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 OCIAD1Q9NX40 245 aa24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 SLC39A1Q9NY26 324 aa24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 TAS2R13Q9NYV9 303 aa24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 KLHL42Q9P2K6 505 aa24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 SLC17A6Q9P2U8 582 aa24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 TRMT6Q9UJA5 497 aaKnown RBP24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 ZMIZ1Q9ULJ6 1067 aa24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 DHRS7Q9Y394 339 aa24.64■■□□□ 1.54
TSPAN4-207ENST00000397411 CHD8Q9HCK8 2581 aa24.63■■□□□ 1.53
TSPAN4-207ENST00000397411 MATN2O00339 956 aa24.63■■□□□ 1.53
TSPAN4-207ENST00000397411 KIF1CO43896 1103 aaKnown RBP24.63■■□□□ 1.53
TSPAN4-207ENST00000397411 ABCG1P45844 678 aa24.63■■□□□ 1.53
TSPAN4-207ENST00000397411 CLCN7P51798 805 aa24.63■■□□□ 1.53
TSPAN4-207ENST00000397411 IGF2-ASQ6U949 168 aa24.63■■□□□ 1.53
TSPAN4-207ENST00000397411 PROSER1Q86XN7 944 aa24.63■■□□□ 1.53
TSPAN4-207ENST00000397411 DCUN1D3Q8IWE4 304 aa24.63■■□□□ 1.53
TSPAN4-207ENST00000397411 RAB42Q8N4Z0 105 aa24.63■■□□□ 1.53
TSPAN4-207ENST00000397411 GPATCH11Q8N954 259 aa24.63■■□□□ 1.53
TSPAN4-207ENST00000397411 MAGEC3Q8TD91 643 aa24.63■■□□□ 1.53
TSPAN4-207ENST00000397411 TAAR9Q96RI9 348 aa24.63■■□□□ 1.53
TSPAN4-207ENST00000397411 PHACTR1Q9C0D0 580 aa24.63■■□□□ 1.53
TSPAN4-207ENST00000397411 NSMCE4AQ9NXX6 385 aa24.63■■□□□ 1.53
TSPAN4-207ENST00000397411 MOCS1Q9NZB8 636 aa24.63■■□□□ 1.53
TSPAN4-207ENST00000397411 DMGDHQ9UI17 866 aaKnown RBP24.63■■□□□ 1.53
TSPAN4-207ENST00000397411 SLC39A10Q9ULF5 831 aa24.63■■□□□ 1.53
TSPAN4-207ENST00000397411 PLAGL1Q9UM63 463 aa24.63■■□□□ 1.53
TSPAN4-207ENST00000397411 ACACBO00763 2458 aa24.63■■□□□ 1.53
TSPAN4-207ENST00000397411 CAPNS1P04632 268 aa24.62■■□□□ 1.53
TSPAN4-207ENST00000397411 GSTA2P09210 222 aa24.62■■□□□ 1.53
TSPAN4-207ENST00000397411 ANKRD34CP0C6C1 535 aa24.62■■□□□ 1.53
TSPAN4-207ENST00000397411 FGF3P11487 239 aaPredicted RBP24.62■■□□□ 1.53
TSPAN4-207ENST00000397411 GABRB3P28472 473 aa24.62■■□□□ 1.53
TSPAN4-207ENST00000397411 ATP5DP30049 168 aa24.62■■□□□ 1.53
TSPAN4-207ENST00000397411 ETV5P41161 510 aa24.62■■□□□ 1.53
TSPAN4-207ENST00000397411 SKIV2L2P42285 1042 aaKnown RBP24.62■■□□□ 1.53
TSPAN4-207ENST00000397411 PPP1CAP62136 330 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms