RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 PDP2Q9P2J9 529 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 RUVBL2Q9Y230 463 aaKnown RBP20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 TDRKHQ9Y2W6 561 aaKnown RBP20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 LOXL2Q9Y4K0 774 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 PSAT1Q9Y617 370 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 A8MU76 341 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 VPS26AO75436 327 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 GSTA2P09210 222 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 RHOXF2BP0C7M4 288 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 ATP5DP30049 168 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 GPX6P59796 221 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 PPP1CAP62136 330 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 EIF3IQ13347 325 aaKnown RBP20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 TTLL9Q3SXZ7 439 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 ACSBG2Q5FVE4 666 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 IRGCQ6NXR0 463 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 UNC5DQ6UXZ4 953 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 C3orf62Q6ZUJ4 267 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 SPNS2Q8IVW8 549 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 OR4E2Q8NGC2 313 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 MDM1Q8TC05 714 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 NRTNQ99748 197 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 RHOXF2Q9BQY4 288 aa20.61■□□□□ 0.89
TSPAN4-206ENST00000397408 FREM2Q5SZK8 3169 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 TCRBV9S1A1TA0A576 114 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 OR6C74A6NCV1 312 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 OR5K3A6NET4 321 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 PLD2O14939 933 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 HGSO14964 777 aaPredicted RBP20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 PIAS1O75925 651 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 C9P02748 559 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 HGFP14210 728 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 LSSP48449 732 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 CYP4F3Q08477 520 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 CUL1Q13616 776 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 STRA8Q7Z7C7 330 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 SLC26A11Q86WA9 606 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 FBXO39Q8N4B4 442 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 GPATCH11Q8N954 259 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 CD200R1Q8TD46 325 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 FMO2Q99518 471 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 CMKLR1Q99788 373 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 SRMSQ9H3Y6 488 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 TFB2MQ9H5Q4 396 aaKnown RBP20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 XKR8Q9H6D3 395 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 CCDC86Q9H6F5 360 aaKnown RBP20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 LRRC4CQ9HCJ2 640 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 SMYD2Q9NRG4 433 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 HRASLS2Q9NWW9 162 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 AKAP7Q9P0M2 348 aaPredicted RBP20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 KLHL42Q9P2K6 505 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 POLG2Q9UHN1 485 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 NFS1Q9Y697 457 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 ASPMQ8IZT6 3477 aa20.6■□□□□ 0.89
TSPAN4-206ENST00000397408 BRINP1O60477 761 aa20.59■□□□□ 0.89
TSPAN4-206ENST00000397408 RPN2P04844 631 aa20.59■□□□□ 0.89
TSPAN4-206ENST00000397408 ECHS1P30084 290 aa20.59■□□□□ 0.89
TSPAN4-206ENST00000397408 FAM92BQ6ZTR7 304 aa20.59■□□□□ 0.89
TSPAN4-206ENST00000397408 CEP128Q6ZU80 1094 aa20.59■□□□□ 0.89
TSPAN4-206ENST00000397408 DCUN1D3Q8IWE4 304 aa20.59■□□□□ 0.89
TSPAN4-206ENST00000397408 CDKL2Q92772 493 aa20.59■□□□□ 0.89
TSPAN4-206ENST00000397408 ZDHHC12Q96GR4 267 aa20.59■□□□□ 0.89
TSPAN4-206ENST00000397408 RAB33BQ9H082 229 aa20.59■□□□□ 0.89
TSPAN4-206ENST00000397408 NSMCE4AQ9NXX6 385 aa20.59■□□□□ 0.89
TSPAN4-206ENST00000397408 EPHA6Q9UF33 1036 aa20.59■□□□□ 0.89
TSPAN4-206ENST00000397408 PISDQ9UG56 409 aa20.59■□□□□ 0.89
TSPAN4-206ENST00000397408 TRMT6Q9UJA5 497 aaKnown RBP20.59■□□□□ 0.89
TSPAN4-206ENST00000397408 CORO1CQ9ULV4 474 aaPredicted RBP20.59■□□□□ 0.89
TSPAN4-206ENST00000397408 PLAGL1Q9UM63 463 aa20.59■□□□□ 0.89
TSPAN4-206ENST00000397408 ICKQ9UPZ9 632 aa20.59■□□□□ 0.89
TSPAN4-206ENST00000397408 DHRS7Q9Y394 339 aa20.59■□□□□ 0.89
TSPAN4-206ENST00000397408 PCDHGA8Q9Y5G5 932 aa20.59■□□□□ 0.89
TSPAN4-206ENST00000397408 APC2O95996 2303 aa20.58■□□□□ 0.89
TSPAN4-206ENST00000397408 RASSF9O75901 435 aa20.58■□□□□ 0.88
TSPAN4-206ENST00000397408 JMJD7P0C870 316 aa20.58■□□□□ 0.88
TSPAN4-206ENST00000397408 CSTF2P33240 577 aaKnown RBP eCLIP20.58■□□□□ 0.88
TSPAN4-206ENST00000397408 BDKRB1P46663 353 aa20.58■□□□□ 0.88
TSPAN4-206ENST00000397408 CDKN2DP55273 166 aa20.58■□□□□ 0.88
TSPAN4-206ENST00000397408 KLHL38Q2WGJ6 581 aa20.58■□□□□ 0.88
TSPAN4-206ENST00000397408 ARMC6Q6NXE6 501 aa20.58■□□□□ 0.88
TSPAN4-206ENST00000397408 ARHGAP22Q7Z5H3 698 aa20.58■□□□□ 0.88
TSPAN4-206ENST00000397408 AMIGO1Q86WK6 493 aa20.58■□□□□ 0.88
TSPAN4-206ENST00000397408 CPNE9Q8IYJ1 553 aa20.58■□□□□ 0.88
TSPAN4-206ENST00000397408 AGBL5Q8NDL9 886 aa20.58■□□□□ 0.88
TSPAN4-206ENST00000397408 INPP5DQ92835 1189 aa20.58■□□□□ 0.88
TSPAN4-206ENST00000397408 PRR11Q96HE9 360 aaPredicted RBP20.58■□□□□ 0.88
TSPAN4-206ENST00000397408 FOPNLQ96NB1 174 aa20.58■□□□□ 0.88
TSPAN4-206ENST00000397408 CNTNAP3BQ96NU0 1288 aa20.58■□□□□ 0.88
TSPAN4-206ENST00000397408 CNTNAP3Q9BZ76 1288 aa20.58■□□□□ 0.88
TSPAN4-206ENST00000397408 TAS2R13Q9NYV9 303 aa20.58■□□□□ 0.88
TSPAN4-206ENST00000397408 FAM159BA6NKW6 160 aa20.57■□□□□ 0.88
TSPAN4-206ENST00000397408 CXorf49A8MYA2 514 aaPredicted RBP20.57■□□□□ 0.88
TSPAN4-206ENST00000397408 BTN3A1O00481 513 aa20.57■□□□□ 0.88
TSPAN4-206ENST00000397408 KIF1CO43896 1103 aaKnown RBP20.57■□□□□ 0.88
TSPAN4-206ENST00000397408 KDM1AO60341 852 aa20.57■□□□□ 0.88
TSPAN4-206ENST00000397408 SPAG6O75602 509 aa20.57■□□□□ 0.88
TSPAN4-206ENST00000397408 POLR2CP19387 275 aaPredicted RBP20.57■□□□□ 0.88
TSPAN4-206ENST00000397408 ITIH1P19827 911 aa20.57■□□□□ 0.88
TSPAN4-206ENST00000397408 MCM3P25205 808 aa20.57■□□□□ 0.88
TSPAN4-206ENST00000397408 STX2P32856 288 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms