RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 RAB43Q86YS6 212 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 SYTL1Q8IYJ3 562 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 CFAP206Q8IYR0 622 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 IQCKQ8N0W5 287 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 ACVR1CQ8NER5 493 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 OR8K1Q8NGG5 319 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 OR1L3Q8NH93 324 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 BLOC1S5Q8TDH9 187 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 HEXDCQ8WVB3 486 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 LCN9Q8WX39 176 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 FCRL5Q96RD9 977 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 DHRS4Q9BTZ2 278 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 TLR10Q9BXR5 811 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 SRMSQ9H3Y6 488 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 ACTR5Q9H9F9 607 aaPredicted RBP8.5□□□□□ -1.05
CAPN3-208ENST00000397204 PCMTD2Q9NV79 361 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 TRHDEQ9UKU6 1024 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 POMT2Q9UKY4 750 aa8.5□□□□□ -1.05
CAPN3-208ENST00000397204 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.5□□□□□ -1.05
CAPN3-208ENST00000397204 A1L4Q6 167 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 C5orf60A6NFR6 353 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 AGAP14A8MT82 685 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 TMEM150CB9EJG8 249 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 C9J4A7 227 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 BUD23O43709 281 aaKnown RBP8.49□□□□□ -1.05
CAPN3-208ENST00000397204 CST8O60676 142 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 LCA5LO95447 670 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 LDLRP01130 860 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 KRT1P04264 644 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 POLBP06746 335 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 RNF224P0DH78 156 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 RALBP11234 206 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 CYP2A7P20853 494 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 PBLDP30039 288 aaPredicted RBP8.49□□□□□ -1.05
CAPN3-208ENST00000397204 AKT1P31749 480 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 CA5AP35218 305 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 CDKN2BP42772 138 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 CHRNA4P43681 627 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 CD151P48509 253 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 DYNLT1P63172 113 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 SRSF11Q05519 484 aaKnown RBP8.49□□□□□ -1.05
CAPN3-208ENST00000397204 MRPL49Q13405 166 aaKnown RBP8.49□□□□□ -1.05
CAPN3-208ENST00000397204 SSPNQ14714 243 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 NCF4Q15080 339 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 ZNF789Q5FWF6 425 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 VWA5B1Q5TIE3 1220 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 FBXO38Q6PIJ6 1188 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 MFSD7Q6UXD7 560 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 DET1Q7L5Y6 550 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 RHOT2Q8IXI1 618 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 SVOPQ8N4V2 548 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 UBE2Q2Q8WVN8 375 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 SNRNP40Q96DI7 357 aaKnown RBP8.49□□□□□ -1.05
CAPN3-208ENST00000397204 C19orf60Q96EN9 201 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 DCUN1D1Q96GG9 259 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 OXNAD1Q96HP4 312 aaPredicted RBP8.49□□□□□ -1.05
CAPN3-208ENST00000397204 FER1L6-AS2Q96M78 137 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 PPM1MQ96MI6 270 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 C19orf43Q9BQ61 176 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 ANP32EQ9BTT0 268 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 PITPNM3Q9BZ71 974 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 SLC7A5P2Q9GIP4 190 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 DEF6Q9H4E7 631 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 TFB2MQ9H5Q4 396 aaKnown RBP8.49□□□□□ -1.05
CAPN3-208ENST00000397204 ASB8Q9H765 288 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 SAE1Q9UBE0 346 aaPredicted RBP8.49□□□□□ -1.05
CAPN3-208ENST00000397204 ERRFI1Q9UJM3 462 aaPredicted RBP8.49□□□□□ -1.05
CAPN3-208ENST00000397204 SLC5A6Q9Y289 635 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 B3GNT3Q9Y2A9 372 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 PADI2Q9Y2J8 665 aa8.49□□□□□ -1.05
CAPN3-208ENST00000397204 CCDC66A2RUB6 948 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 ANKUB1A6NFN9 424 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 HACD1B0YJ81 288 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 E7EQ34 232 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 IFRD1O00458 451 aaPredicted RBP8.48□□□□□ -1.05
CAPN3-208ENST00000397204 PEX12O00623 359 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 GPR39O43194 453 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 ZNF749O43361 778 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 SGTAO43765 313 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 AKR1B10O60218 316 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 KLF7O75840 302 aaPredicted RBP8.48□□□□□ -1.05
CAPN3-208ENST00000397204 ANXA9O76027 345 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 SRP72O76094 671 aaKnown RBP8.48□□□□□ -1.05
CAPN3-208ENST00000397204 IPO13O94829 963 aaKnown RBP8.48□□□□□ -1.05
CAPN3-208ENST00000397204 PRAMEF1O95521 474 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 ALPPP05187 535 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 TPM3P06753 285 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 ANP32AP39687 249 aaKnown RBP8.48□□□□□ -1.05
CAPN3-208ENST00000397204 DCTP40126 519 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 ARCN1P48444 511 aaKnown RBP8.48□□□□□ -1.05
CAPN3-208ENST00000397204 SOX8P57073 446 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 ABRQ12979 859 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 RPA4Q13156 261 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 ATP1A4Q13733 1029 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 PTPRCAPQ14761 206 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 MYBPC3Q14896 1274 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 TCEAL1Q15170 157 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 TAF1AQ15573 450 aaPredicted RBP8.48□□□□□ -1.05
CAPN3-208ENST00000397204 GPR33Q49SQ1 333 aa8.48□□□□□ -1.05
CAPN3-208ENST00000397204 PRR30Q53SZ7 412 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms