RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 AKT2P31751 481 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 TRIM23P36406 574 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 RGS4P49798 205 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 WDR4P57081 412 aaKnown RBP12.98□□□□□ -0.33
SEC13-209ENST00000397117 ACAP2Q15057 778 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 TBC1D25Q3MII6 688 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 LRRC8EQ6NSJ5 796 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 DOK6Q6PKX4 331 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 TMEM220Q6QAJ8 160 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 TMEM207Q6UWW9 146 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 ADGRG6Q86SQ4 1221 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 TRAPPC5Q8IUR0 188 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 SPACA3Q8IXA5 215 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 GIMAP7Q8NHV1 300 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 LKAAEAR1Q8TD35 194 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 ANKRD49Q8WVL7 239 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 COX14Q96I36 57 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 MYOCQ99972 504 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 TEX101Q9BY14 249 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 UNKQ9C0B0 810 aaKnown RBP12.98□□□□□ -0.33
SEC13-209ENST00000397117 KLHL42Q9P2K6 505 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 MID2Q9UJV3 735 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 OR1A2Q9Y585 309 aa12.98□□□□□ -0.33
SEC13-209ENST00000397117 CACNB4O00305 520 aaPredicted RBP12.97□□□□□ -0.33
SEC13-209ENST00000397117 TRIM38O00635 465 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 PROCP04070 461 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 RBP1P09455 135 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 MYCLP1P12525 358 aaPredicted RBP12.97□□□□□ -0.33
SEC13-209ENST00000397117 HNRNPA2B1P22626 353 aaKnown RBP12.97□□□□□ -0.33
SEC13-209ENST00000397117 DGKAP23743 735 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 IGFALSP35858 605 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 ETV4P43268 484 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 SERPINB4P48594 390 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 PRLHRP49683 370 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 ATP6V0D1P61421 351 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 E2F1Q01094 437 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 OVGP1Q12889 678 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 DLG1Q12959 904 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 CPNE9Q8IYJ1 553 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 BEND7Q8N7W2 519 aaPredicted RBP12.97□□□□□ -0.33
SEC13-209ENST00000397117 ELMO1Q92556 727 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 LINGO1Q96FE5 620 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 GPR78Q96P69 363 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 SLC30A3Q99726 388 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 MRPL57Q9BQC6 102 aaKnown RBP12.97□□□□□ -0.33
SEC13-209ENST00000397117 CCM2Q9BSQ5 444 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 DERL2Q9GZP9 239 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 ATXN10Q9UBB4 475 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 EMCNQ9ULC0 261 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 DMTF1Q9Y222 760 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 TMEM98Q9Y2Y6 226 aa12.97□□□□□ -0.33
SEC13-209ENST00000397117 WDR91A4D1P6 747 aa12.96□□□□□ -0.33
SEC13-209ENST00000397117 SIGLEC6O43699 453 aa12.96□□□□□ -0.33
SEC13-209ENST00000397117 MT-CO3P00414 261 aa12.96□□□□□ -0.33
SEC13-209ENST00000397117 CBSLP0DN79 551 aa12.96□□□□□ -0.33
SEC13-209ENST00000397117 CD1DP15813 335 aa12.96□□□□□ -0.33
SEC13-209ENST00000397117 ZNF8P17098 575 aaPredicted RBP12.96□□□□□ -0.33
SEC13-209ENST00000397117 CBSP35520 551 aa12.96□□□□□ -0.33
SEC13-209ENST00000397117 NUDT1P36639 197 aa12.96□□□□□ -0.33
SEC13-209ENST00000397117 CTSCP53634 463 aa12.96□□□□□ -0.33
SEC13-209ENST00000397117 GNGT1P63211 74 aa12.96□□□□□ -0.33
SEC13-209ENST00000397117 CFHR1Q03591 330 aa12.96□□□□□ -0.33
SEC13-209ENST00000397117 BOP1Q14137 746 aaKnown RBP12.96□□□□□ -0.33
SEC13-209ENST00000397117 BCL7AQ4VC05 210 aa12.96□□□□□ -0.33
SEC13-209ENST00000397117 SYTL3Q4VX76 610 aa12.96□□□□□ -0.33
SEC13-209ENST00000397117 SLC25A45Q8N413 288 aa12.96□□□□□ -0.33
SEC13-209ENST00000397117 FSTL5Q8N475 847 aaPredicted RBP12.96□□□□□ -0.33
SEC13-209ENST00000397117 EEF1AKMT1Q8WVE0 214 aa12.96□□□□□ -0.33
SEC13-209ENST00000397117 SREK1Q8WXA9 508 aaKnown RBP12.96□□□□□ -0.33
SEC13-209ENST00000397117 FUBP1Q96AE4 644 aaKnown RBP12.96□□□□□ -0.33
SEC13-209ENST00000397117 APOOQ9BUR5 198 aa12.96□□□□□ -0.33
SEC13-209ENST00000397117 LGR4Q9BXB1 951 aa12.96□□□□□ -0.33
SEC13-209ENST00000397117 MRPL46Q9H2W6 279 aaKnown RBP12.96□□□□□ -0.33
SEC13-209ENST00000397117 LATS2Q9NRM7 1088 aa12.96□□□□□ -0.33
SEC13-209ENST00000397117 CPSF2Q9P2I0 782 aaKnown RBP12.96□□□□□ -0.33
SEC13-209ENST00000397117 XPR1Q9UBH6 696 aa12.96□□□□□ -0.33
SEC13-209ENST00000397117 GPR34Q9UPC5 381 aa12.96□□□□□ -0.33
SEC13-209ENST00000397117 MAST4O15021 2626 aa12.96□□□□□ -0.34
SEC13-209ENST00000397117 MYO18BQ8IUG5 2567 aa12.96□□□□□ -0.34
SEC13-209ENST00000397117 ATMQ13315 3056 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 GPR89AB7ZAQ6 455 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 PRAMEF26H0Y7S4 382 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 BIRC5O15392 142 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 SGTAO43765 313 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 GPR89BP0CG08 455 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 DHRS4L1P0CG22 281 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 MYL2P10916 166 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 CPA3P15088 417 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 TFEBP19484 476 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 AOAHP28039 575 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 CCR7P32248 378 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 HSPA14Q0VDF9 509 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 PLEKHS1Q5SXH7 462 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 NAPRTQ6XQN6 538 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 NUDCD3Q8IVD9 361 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 SPNS2Q8IVW8 549 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 MYO1HQ8N1T3 1032 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 RDH11Q8TC12 318 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 ASZ1Q8WWH4 475 aa12.95□□□□□ -0.34
SEC13-209ENST00000397117 ZMYND15Q9H091 742 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms