RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 LIMK2P53671 638 aa13.77□□□□□ -0.21
COL4A3-202ENST00000396578 ZACNQ401N2 412 aa13.77□□□□□ -0.21
COL4A3-202ENST00000396578 FBXO43Q4G163 708 aa13.77□□□□□ -0.21
COL4A3-202ENST00000396578 MSANTD2Q6P1R3 559 aa13.77□□□□□ -0.21
COL4A3-202ENST00000396578 DNAJB8Q8NHS0 232 aa13.77□□□□□ -0.21
COL4A3-202ENST00000396578 C12orf43Q96C57 262 aaKnown RBP13.77□□□□□ -0.21
COL4A3-202ENST00000396578 RAI2Q9Y5P3 530 aa13.77□□□□□ -0.21
COL4A3-202ENST00000396578 PPRC1Q5VV67 1664 aaKnown RBP13.77□□□□□ -0.21
COL4A3-202ENST00000396578 CEMIPQ8WUJ3 1361 aa13.77□□□□□ -0.21
COL4A3-202ENST00000396578 MANSC4A6NHS7 340 aaPredicted RBP13.77□□□□□ -0.21
COL4A3-202ENST00000396578 FGF19O95750 216 aa13.77□□□□□ -0.21
COL4A3-202ENST00000396578 SCGB1D2O95969 90 aa13.77□□□□□ -0.21
COL4A3-202ENST00000396578 HTR7P34969 479 aa13.77□□□□□ -0.21
COL4A3-202ENST00000396578 XKP51811 444 aa13.77□□□□□ -0.21
COL4A3-202ENST00000396578 BEX3Q00994 111 aa13.77□□□□□ -0.21
COL4A3-202ENST00000396578 PHPT1Q9NRX4 125 aaPredicted RBP13.77□□□□□ -0.21
COL4A3-202ENST00000396578 DNAJB9Q9UBS3 223 aa13.77□□□□□ -0.21
COL4A3-202ENST00000396578 HES2Q9Y543 173 aa13.77□□□□□ -0.21
COL4A3-202ENST00000396578 NOTOA8MTQ0 251 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 ENTPD6O75354 484 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 PSMD10O75832 226 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 SMAD3P84022 425 aaKnown RBP13.76□□□□□ -0.21
COL4A3-202ENST00000396578 COX18Q8N8Q8 333 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 C9orf43Q8TAL5 461 aaPredicted RBP13.76□□□□□ -0.21
COL4A3-202ENST00000396578 ZBED6CLQ96FA7 236 aaPredicted RBP13.76□□□□□ -0.21
COL4A3-202ENST00000396578 PCBD2Q9H0N5 130 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 DERAQ9Y315 318 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 GPR153Q6NV75 609 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 SYCE2Q6PIF2 218 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 ALG3Q92685 438 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 RBM18Q96H35 190 aaKnown RBP13.76□□□□□ -0.21
COL4A3-202ENST00000396578 FAM237AA0A1B0GTK4 181 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 MAFO75444 373 aaPredicted RBP13.76□□□□□ -0.21
COL4A3-202ENST00000396578 NDST3O95803 873 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 PTF1AQ7RTS3 328 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 STOML3Q8TAV4 291 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 SMG7Q92540 1137 aaKnown RBP13.76□□□□□ -0.21
COL4A3-202ENST00000396578 POMPQ9Y244 141 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 EPHB6O15197 1021 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 CYP17A1P05093 508 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 PCCBP05166 539 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 SLC35G6P0C7Q6 338 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 ALG1LQ6GMV1 187 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 ANKS1BQ7Z6G8 1248 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 TESCQ96BS2 214 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 DPAGT1Q9H3H5 408 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 DISP2A7MBM2 1401 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 C1RP00736 705 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 SLC7A1P30825 629 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 CSTF2P33240 577 aaKnown RBP eCLIP13.76□□□□□ -0.21
COL4A3-202ENST00000396578 CAND1Q86VP6 1230 aaKnown RBP13.76□□□□□ -0.21
COL4A3-202ENST00000396578 TOMM5Q8N4H5 51 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 DNAJC19Q96DA6 116 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 PRICKLE1Q96MT3 831 aaPredicted RBP13.76□□□□□ -0.21
COL4A3-202ENST00000396578 GAL3ST1Q99999 423 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 CDT1Q9H211 546 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 HMX1Q9NP08 348 aaPredicted RBP13.76□□□□□ -0.21
COL4A3-202ENST00000396578 LGALS13Q9UHV8 139 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 M0QX08 132 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 GRHL2Q6ISB3 625 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 OTOP3Q7RTS5 596 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 LMLNQ96KR4 655 aa13.76□□□□□ -0.21
COL4A3-202ENST00000396578 A0A1W2PQ67 120 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 OR1F1O43749 312 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 C8GP07360 202 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 FSTL4Q6MZW2 842 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 CHRAC1Q9NRG0 131 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 C14orf105Q9NVL8 296 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 TVP23BQ9NYZ1 205 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 FBXW2Q9UKT8 454 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 IQCF5A8MTL0 148 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 E9PAM4 449 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 PTPRAP18433 802 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 ARFRP1Q13795 201 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 CPNE9Q8IYJ1 553 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 NAT16Q8N8M0 369 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 MERTKQ12866 999 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 FAM189A2Q15884 450 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 SCGB2B2Q4G0G5 96 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 C6orf183Q5T699 404 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 FOXR2Q6PJQ5 311 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 SLC35G5Q96KT7 338 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 KCTD15Q96SI1 283 aaPredicted RBP13.75□□□□□ -0.21
COL4A3-202ENST00000396578 ABCD2Q9UBJ2 740 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 JCADQ9P266 1359 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 A0A1W2PQH9 124 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 VIPP01282 170 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 FASTKD3Q14CZ7 662 aaKnown RBP13.75□□□□□ -0.21
COL4A3-202ENST00000396578 TARBP2Q15633 366 aaKnown RBP13.75□□□□□ -0.21
COL4A3-202ENST00000396578 HAS1Q92839 578 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 DNAAF2Q9NVR5 837 aaKnown RBP13.75□□□□□ -0.21
COL4A3-202ENST00000396578 PIP5K1BO14986 540 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 CPN2P22792 545 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 MMP8P22894 467 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 ALG10Q5BKT4 473 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 RALGPS1Q5JS13 557 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 EMID1Q96A84 441 aaPredicted RBP13.75□□□□□ -0.21
COL4A3-202ENST00000396578 ABCG4Q9H172 646 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 TAS2R1Q9NYW7 299 aa13.75□□□□□ -0.21
COL4A3-202ENST00000396578 MFSD11O43934 449 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms