RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 WARS2Q9UGM6 360 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 OARD1Q9Y530 152 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 J3KR12 359 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 PIRTP0C851 137 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 UGT1A4P22310 534 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 UGT1A3P35503 534 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 UGT1A5P35504 534 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 CHI3L1P36222 383 aaPredicted RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 CAPZA2P47755 286 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 CCR8P51685 355 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ACVR1Q04771 509 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 GTF2H2Q13888 395 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 SPIDRQ14159 915 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 C5orf22Q49AR2 442 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 TECRLQ5HYJ1 363 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 LRRC66Q68CR7 880 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 GTF2H2CQ6P1K8 395 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 EPGNQ6UW88 154 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 HIPK1Q86Z02 1210 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 SVOPQ8N4V2 548 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ZNF248Q8NDW4 579 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 MECRQ9BV79 373 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 EPB41L4BQ9H329 900 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 TMPRSS4Q9NRS4 437 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 USE1Q9NZ43 259 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 GPRC5BQ9NZH0 403 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 OR6C2Q9NZP2 312 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 EVLQ9UI08 416 aaPredicted RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 FBXO10Q9UK96 956 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ANGPT4Q9Y264 503 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 FPGTO14772 594 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 DNAJB5O75953 348 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 CBX6O95503 412 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 HOXB2P14652 356 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 MPIP34949 423 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 RAB28P51157 221 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 POLR2JP52435 117 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 MRPS21P82921 87 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 TMIGD1Q6UXZ0 262 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 C16orf59Q7L2K0 433 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 BNIPLQ7Z465 357 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 CFAP206Q8IYR0 622 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 LPGAT1Q92604 370 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 C17orf62Q9BQA9 187 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 GSDMCQ9BYG8 508 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 BTBD1Q9H0C5 482 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 EHD1Q9H4M9 534 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 MRPL42Q9Y6G3 142 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 TP53BP1Q12888 1972 aaPredicted RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 SLC35E2BP0CK96 405 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ACRV1P26436 265 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 PSMD4P55036 377 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 RUNX1T1Q06455 604 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ABHD18Q0P651 414 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 TIGD2Q4W5G0 525 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 NUDT13Q86X67 352 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 CAMKVQ8NCB2 501 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 OR8J3Q8NGG0 315 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 PHF10Q8WUB8 498 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ZFPM2Q8WW38 1151 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 MARK4Q96L34 752 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 CYP2S1Q96SQ9 504 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 KRT84Q9NSB2 600 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 PIEZO2Q9H5I5 2752 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ELOVL7A1L3X0 281 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 HYKKA2RU49 373 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 TTC36A6NLP5 189 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 PRR5-ARHGAP8B1AHC4 643 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 CCL16O15467 120 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 PSMG1O95456 288 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 VIPP01282 170 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 CMPK1P30085 196 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 SLC7A1P30825 629 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ARRB1P49407 418 aaPredicted RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 SLC7A2P52569 658 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ARHGAP8P85298 464 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 PUS10Q3MIT2 529 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 TBCELQ5QJ74 424 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 GPRC6AQ5T6X5 926 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ZNF544Q6NX49 715 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 HACD2Q6Y1H2 254 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 DPY19L3Q6ZPD9 716 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 RPL10LQ96L21 214 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 PPP1R36Q96LQ0 422 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ZNF347Q96SE7 839 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 CD244Q9BZW8 370 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 SDR39U1Q9NRG7 319 aaPredicted RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 GKN1Q9NS71 199 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 POLR3BQ9NW08 1133 aaPredicted RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 FBXL21Q9UKT6 434 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ATP6AP2A0A1C7CYW4 349 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 LDB2O43679 373 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 ATP6AP2O75787 350 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 SCELO95171 688 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 FAM58BPP0C7Q3 252 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 COPZ1P61923 177 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 TSNQ15631 228 aaKnown RBP3.32□□□□□ -1.88
VPS13C-203ENST00000395896 MSS51Q4VC12 460 aa3.32□□□□□ -1.88
VPS13C-203ENST00000395896 TMC5Q6UXY8 1006 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms