RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 MYBPC3Q14896 1274 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 C16orf72Q14CZ0 275 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 IMPG1Q17R60 797 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 USP51Q70EK9 711 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 ZSWIM9Q86XI8 627 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 HS6ST3Q8IZP7 471 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 ITFG1Q8TB96 612 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 EGFL8Q99944 293 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 THUMPD3Q9BV44 507 aaKnown RBP13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 ADGRE3Q9BY15 652 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 INVSQ9Y283 1065 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 SLC30A1Q9Y6M5 507 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 U3KQV3 271 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 EEF1B2P24534 225 aaKnown RBP13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 HMOX2P30519 316 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 MTHFRP42898 656 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 PTGER3P43115 390 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 ARSFP54793 590 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 PHC1P78364 1004 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 FAM43BQ6ZT52 329 aaPredicted RBP13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 LIX1Q8N485 282 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 FEM1AQ9BSK4 669 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 ASB8Q9H765 288 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 FANCEQ9HB96 536 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 IL26Q9NPH9 171 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 TIMMDC1Q9NPL8 285 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 ZNF639Q9UID6 485 aa13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 ARIH1Q9Y4X5 557 aaPredicted RBP13.22□□□□□ -0.29
GTF2F1-201ENST00000394456 LOC730098B7Z3J9 87 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 ESR1P03372 595 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 CKMP06732 381 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 PSMA3P25788 255 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 NEK2P51955 445 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 CDH18Q13634 790 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 ZXDCQ2QGD7 858 aaPredicted RBP13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 GAREM2Q75VX8 874 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 GALNT10Q86SR1 603 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 CLEC4FQ8N1N0 589 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 PAF1Q8N7H5 531 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 SLC22A17Q8WUG5 538 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 PIH1D2Q8WWB5 315 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 TOR3AQ9H497 397 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 HPS4Q9NQG7 708 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 NUDT4Q9NZJ9 180 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 LIMD1Q9UGP4 676 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 PKP3Q9Y446 797 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 PCDHB3Q9Y5E6 796 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 C5orf42Q9H799 3197 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 C1orf232A0A0U1RR37 186 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 TGM5O43548 720 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 FZD6O60353 706 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 MAN1A2O60476 641 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 GREM1O60565 184 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 CDH1P12830 882 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 GGT1P19440 569 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 AGXTP21549 392 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 ESRRGP62508 458 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 C1orf53Q5VUE5 145 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 RBM23Q86U06 439 aaKnown RBP13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 TNIP2Q8NFZ5 429 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 TSPEARQ8WU66 669 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 GTF2H4Q92759 462 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 GFM2Q969S9 779 aaKnown RBP13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 AMBRA1Q9C0C7 1298 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 SMG9Q9H0W8 520 aaKnown RBP13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 FBXO10Q9UK96 956 aa13.21□□□□□ -0.29
GTF2F1-201ENST00000394456 ZBBXA8MT70 800 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 PFDN1O60925 122 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 FGF18O76093 207 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 KCNH1O95259 989 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 ALBP02768 609 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 ALPLP05186 524 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 ANXA6P08133 673 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 ZNF182P17025 639 aaPredicted RBP13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 CLCN4P51793 760 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 CACNG1Q06432 222 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 PWP1Q13610 501 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 PCBP2Q15366 365 aaKnown RBP eCLIP13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 CHRNA6Q15825 494 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 FXNQ16595 210 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 MEP1AQ16819 746 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 TPGS1Q6ZTW0 290 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 RGL4Q8IZJ4 473 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 DPP10Q8N608 796 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 PDPRQ8NCN5 879 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 BPIFB6Q8NFQ5 453 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 FRS2Q8WU20 508 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 SLC13A3Q8WWT9 602 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 BARD1Q99728 777 aaKnown RBP13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 ADNPQ9H2P0 1102 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 PTBP2Q9UKA9 531 aaKnown RBP13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 DLGAP4Q9Y2H0 992 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 PRKD3O94806 890 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 PRSS23O95084 383 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 TIMP1P01033 207 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 FCGR1AP12314 374 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 TACR1P25103 407 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 MLLT10P55197 1068 aa13.2□□□□□ -0.3
GTF2F1-201ENST00000394456 CPSF6Q16630 551 aaKnown RBP eCLIP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms