RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 CD68P34810 354 aaPredicted RBP18.2■□□□□ 0.5
SNCB-202ENST00000393693 CDK18Q07002 472 aa18.2■□□□□ 0.5
SNCB-202ENST00000393693 DNASE1L3Q13609 305 aa18.2■□□□□ 0.5
SNCB-202ENST00000393693 ASB18Q6ZVZ8 466 aa18.2■□□□□ 0.5
SNCB-202ENST00000393693 C11orf96Q7Z7L8 435 aa18.2■□□□□ 0.5
SNCB-202ENST00000393693 SPATA22Q8NHS9 363 aa18.2■□□□□ 0.5
SNCB-202ENST00000393693 CT55Q8WUE5 264 aa18.2■□□□□ 0.5
SNCB-202ENST00000393693 CXorf40BQ96DE9 158 aa18.2■□□□□ 0.5
SNCB-202ENST00000393693 SLC25A51Q9H1U9 297 aa18.2■□□□□ 0.5
SNCB-202ENST00000393693 NFKBIL1Q9UBC1 381 aaPredicted RBP18.2■□□□□ 0.5
SNCB-202ENST00000393693 A0A087WUV0 522 aaPredicted RBP18.19■□□□□ 0.5
SNCB-202ENST00000393693 BLACEA4D250 179 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 GOLGA8KD6RF30 607 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 F5H423 210 aaPredicted RBP18.19■□□□□ 0.5
SNCB-202ENST00000393693 VEGFDO43915 354 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 CREG1O75629 220 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 DNAJB5O75953 348 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 ACSL3O95573 720 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 MT-CYBP00156 380 aaPredicted RBP18.19■□□□□ 0.5
SNCB-202ENST00000393693 CCNYL3P0C7X3 344 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 NELFEP18615 380 aaKnown RBP18.19■□□□□ 0.5
SNCB-202ENST00000393693 CD97P48960 835 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 KCNAB1Q14722 419 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.19■□□□□ 0.5
SNCB-202ENST00000393693 ATP13A5Q4VNC0 1218 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 CEP85LQ5SZL2 805 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 PDPK2PQ6A1A2 396 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 PPP1R3BQ86XI6 285 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 LURAP1LQ8IV03 231 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 KLHDC8BQ8IXV7 354 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 KRT222Q8N1A0 295 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 TADA1Q96BN2 335 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 PSMG3-AS1Q96PY0 264 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 ROPN1BQ9BZX4 212 aaPredicted RBP18.19■□□□□ 0.5
SNCB-202ENST00000393693 VPS37BQ9H9H4 285 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 ROPN1Q9HAT0 212 aaPredicted RBP18.19■□□□□ 0.5
SNCB-202ENST00000393693 LHX9Q9NQ69 397 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 RAD18Q9NS91 495 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 KCND3Q9UK17 655 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 PADI1Q9ULC6 663 aa18.19■□□□□ 0.5
SNCB-202ENST00000393693 NBPF19A0A087WUL8 3843 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 IGHV5-51A0A0C4DH38 117 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 RFPL1O75677 317 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 GSTA2P09210 222 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 MYZAPP0CAP1 466 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 FOLR1P15328 257 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 NPY2RP49146 381 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 TMEM115Q12893 351 aaPredicted RBP18.18■□□□□ 0.5
SNCB-202ENST00000393693 MPP3Q13368 585 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 AGAP9Q5VTM2 703 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 FAM199XQ6PEV8 388 aaPredicted RBP18.18■□□□□ 0.5
SNCB-202ENST00000393693 WASH2PQ6VEQ5 465 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 CERS6Q6ZMG9 384 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 CAND1Q86VP6 1230 aaKnown RBP18.18■□□□□ 0.5
SNCB-202ENST00000393693 TRAPPC5Q8IUR0 188 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 ANKMY2Q8IV38 441 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 FBXO36Q8NEA4 188 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 GPR150Q8NGU9 434 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 ZDHHC12Q96GR4 267 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 NAT9Q9BTE0 207 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 TMEM109Q9BVC6 243 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 TRIM55Q9BYV6 548 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 EPB41L4BQ9H329 900 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 PPCSQ9HAB8 311 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 WASH6PQ9NQA3 447 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 FAM53CQ9NYF3 392 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 UBP1Q9NZI7 540 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 EPHA6Q9UF33 1036 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 PCDHGA6Q9Y5G7 932 aa18.18■□□□□ 0.5
SNCB-202ENST00000393693 ZNF106Q9H2Y7 1883 aaKnown RBP18.18■□□□□ 0.5
SNCB-202ENST00000393693 SDR42E2A6NKP2 422 aa18.17■□□□□ 0.5
SNCB-202ENST00000393693 PMPCBO75439 489 aa18.17■□□□□ 0.5
SNCB-202ENST00000393693 NTRK1P04629 796 aa18.17■□□□□ 0.5
SNCB-202ENST00000393693 CA5AP35218 305 aa18.17■□□□□ 0.5
SNCB-202ENST00000393693 ELK3P41970 407 aa18.17■□□□□ 0.5
SNCB-202ENST00000393693 MAGEA3P43357 314 aa18.17■□□□□ 0.5
SNCB-202ENST00000393693 UQCRFS1P47985 274 aa18.17■□□□□ 0.5
SNCB-202ENST00000393693 RPS18P62269 152 aaKnown RBP18.17■□□□□ 0.5
SNCB-202ENST00000393693 MSS51Q4VC12 460 aa18.17■□□□□ 0.5
SNCB-202ENST00000393693 KCTD11Q693B1 232 aa18.17■□□□□ 0.5
SNCB-202ENST00000393693 HIST2H2BCQ6DN03 193 aa18.17■□□□□ 0.5
SNCB-202ENST00000393693 PWWP2BQ6NUJ5 590 aa18.17■□□□□ 0.5
SNCB-202ENST00000393693 ATCAYQ86WG3 371 aa18.17■□□□□ 0.5
SNCB-202ENST00000393693 RBM12BQ8IXT5 1001 aaKnown RBP18.17■□□□□ 0.5
SNCB-202ENST00000393693 DNAAF3Q8N9W5 541 aa18.17■□□□□ 0.5
SNCB-202ENST00000393693 GDAP1Q8TB36 358 aa18.17■□□□□ 0.5
SNCB-202ENST00000393693 VPS35Q96QK1 796 aa18.17■□□□□ 0.5
SNCB-202ENST00000393693 BFARQ9NZS9 450 aa18.17■□□□□ 0.5
SNCB-202ENST00000393693 CHMP2BQ9UQN3 213 aa18.17■□□□□ 0.5
SNCB-202ENST00000393693 NFS1Q9Y697 457 aa18.17■□□□□ 0.5
SNCB-202ENST00000393693 TEX264Q9Y6I9 313 aa18.17■□□□□ 0.5
SNCB-202ENST00000393693 AGPSO00116 658 aa18.16■□□□□ 0.5
SNCB-202ENST00000393693 GPR39O43194 453 aa18.16■□□□□ 0.5
SNCB-202ENST00000393693 NDST3O95803 873 aa18.16■□□□□ 0.5
SNCB-202ENST00000393693 ZNF844Q08AG5 666 aa18.16■□□□□ 0.5
SNCB-202ENST00000393693 CDH17Q12864 832 aa18.16■□□□□ 0.5
SNCB-202ENST00000393693 TUBB3Q13509 450 aa18.16■□□□□ 0.5
SNCB-202ENST00000393693 KRT71Q3SY84 523 aa18.16■□□□□ 0.5
SNCB-202ENST00000393693 HP1BP3Q5SSJ5 553 aaPredicted RBP18.16■□□□□ 0.5
SNCB-202ENST00000393693 FAM83HQ6ZRV2 1179 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms