RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 GPR19Q15760 415 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 SLC35G1Q2M3R5 365 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 CYP27C1Q4G0S4 372 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 INO80DQ53TQ3 878 aaPredicted RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 ZBTB37Q5TC79 503 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 DENND6AQ8IWF6 608 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 CDH26Q8IXH8 852 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 GPALPP1Q8IXQ4 340 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 ADGRG5Q8IZF4 528 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 SCRN2Q96FV2 425 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 ART5Q96L15 291 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 CSF3RQ99062 836 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 TINAGL1Q9GZM7 467 aaPredicted RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 IKZF4Q9H2S9 585 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 GHITMQ9H3K2 345 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 SERHLQ9NQF3 203 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 FAM118AQ9NWS6 357 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 INTS6Q9UL03 887 aaKnown RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 SSR3Q9UNL2 185 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 A0A1W2PPL8 197 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 DLGAP1O14490 977 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 STX16O14662 325 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 AP2A2O94973 939 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 HTR3BO95264 441 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 RAP2AP10114 183 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 ACO1P21399 889 aaKnown RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 KDELR1P24390 212 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 PSMA1P25786 263 aaKnown RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 CD6P30203 668 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 POLR2IP36954 125 aaKnown RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 CD79BP40259 229 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 PCP4P48539 62 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 SLC12A3P55017 1021 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 COTL1Q14019 142 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 TCEAL1Q15170 157 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 FAM102AQ5T9C2 384 aaPredicted RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 PDZD4Q76G19 769 aaPredicted RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 SSX6Q7RTT6 188 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 ABRAQ8N0Z2 381 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 ZNF557Q8N988 423 aaPredicted RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 OR6M1Q8NGM8 313 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 AP3S1Q92572 193 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 INTS12Q96CB8 462 aaKnown RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 EXOC2Q96KP1 924 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 RDH12Q96NR8 316 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 PIP5K1AQ99755 562 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 TCEAL7Q9BRU2 100 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 MSTO1Q9BUK6 570 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 ZYG11BQ9C0D3 744 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 SPATA6Q9NWH7 488 aaPredicted RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 GPN3Q9UHW5 284 aaPredicted RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 EVLQ9UI08 416 aaPredicted RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 NOCTQ9UK39 431 aaKnown RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 TRHDEQ9UKU6 1024 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 L7N2F9 121 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 MED7O43513 233 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 TRIM3O75382 744 aaPredicted RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 TOXO94900 526 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 JUNP05412 331 aaKnown RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 PGAM1P18669 254 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 PDHA2P29803 388 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 SHMT2P34897 504 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 CTNNB1P35222 781 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 NNMTP40261 264 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 MAP2K6P52564 334 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 MCCD1P59942 119 aaPredicted RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 EEF1A1P68104 462 aaKnown RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 EEF1A2Q05639 463 aaKnown RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 TSNQ15631 228 aaKnown RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 COL28A1Q2UY09 1125 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 EEF1A1P5Q5VTE0 462 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 XRRA1Q6P2D8 792 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 MAMDC4Q6UXC1 1216 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 NPNTQ6UXI9 565 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 SCARA5Q6ZMJ2 495 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 BEND5Q7L4P6 421 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 RAB11FIP2Q7L804 512 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 CIR1Q86X95 450 aaPredicted RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 CYP4Z2PQ8N1L4 340 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 SVOPLQ8N434 492 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 EFHBQ8N7U6 833 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 NLGN2Q8NFZ4 835 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 C1orf74Q96LT6 269 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 TBCDQ9BTW9 1192 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 POLR3FQ9H1D9 316 aaPredicted RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 CARS2Q9HA77 564 aaKnown RBP7.5□□□□□ -1.21
VTI1A-201ENST00000393077 ABCB8Q9NUT2 735 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 TCAF2A6NFQ2 919 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 OR5K4A6NMS3 321 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 E7ESA3 106 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 PDCD5O14737 125 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 ST8SIA5O15466 376 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 CCNDBP1O95273 360 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 GADD45AP24522 165 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 SSTR2P30874 369 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 ATP6V1E1P36543 226 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 CDKN2BP42772 138 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 AP1S2P56377 157 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 ZNF124Q15973 351 aa7.5□□□□□ -1.21
VTI1A-201ENST00000393077 FKBP1CQ5VVH2 108 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms