RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 MUC13Q9H3R2 512 aa25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 EIF3LQ9Y262 564 aaKnown RBP25.05■■□□□ 1.6
SMARCD3-203ENST00000392811 MYO7AQ13402 2215 aa25.04■■□□□ 1.6
SMARCD3-203ENST00000392811 TSPAN11A1L157 253 aa25.04■■□□□ 1.6
SMARCD3-203ENST00000392811 UPK3BL1B0FP48 263 aa25.04■■□□□ 1.6
SMARCD3-203ENST00000392811 UPK3BL2E5RIL1 263 aa25.04■■□□□ 1.6
SMARCD3-203ENST00000392811 ARNTLO00327 626 aa25.04■■□□□ 1.6
SMARCD3-203ENST00000392811 AP1G1O43747 822 aa25.04■■□□□ 1.6
SMARCD3-203ENST00000392811 MTHFD1P11586 935 aaKnown RBP25.04■■□□□ 1.6
SMARCD3-203ENST00000392811 VARSP26640 1264 aaKnown RBP25.04■■□□□ 1.6
SMARCD3-203ENST00000392811 NNMTP40261 264 aa25.04■■□□□ 1.6
SMARCD3-203ENST00000392811 ETV3P41162 512 aa25.04■■□□□ 1.6
SMARCD3-203ENST00000392811 HID1Q8IV36 788 aa25.04■■□□□ 1.6
SMARCD3-203ENST00000392811 USP7Q93009 1102 aa25.04■■□□□ 1.6
SMARCD3-203ENST00000392811 CNBD2Q96M20 576 aa25.04■■□□□ 1.6
SMARCD3-203ENST00000392811 CIB1Q99828 191 aa25.04■■□□□ 1.6
SMARCD3-203ENST00000392811 SLC29A3Q9BZD2 475 aa25.04■■□□□ 1.6
SMARCD3-203ENST00000392811 YIPF3Q9GZM5 350 aa25.04■■□□□ 1.6
SMARCD3-203ENST00000392811 ZNHIT2Q9UHR6 403 aa25.04■■□□□ 1.6
SMARCD3-203ENST00000392811 PCDHGB4Q9UN71 923 aa25.04■■□□□ 1.6
SMARCD3-203ENST00000392811 PCDHGB5Q9Y5G0 923 aa25.04■■□□□ 1.6
SMARCD3-203ENST00000392811 H0YJX3 145 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 CLDN9O95484 217 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 MPC1LP0DKB6 136 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 TCF3P15923 654 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 DCDC1P59894 354 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 PTGR1Q14914 329 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 KIAA0040Q15053 153 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 SMU1Q2TAY7 513 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 RGL4Q8IZJ4 473 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 ANKFN1Q8N957 763 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 GBP5Q96PP8 586 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 ACTR8Q9H981 624 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 C7orf72A4D263 438 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 IFRD1O00458 451 aaPredicted RBP25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 NCK1P16333 377 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 SYN1P17600 705 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 PSMA4P25789 261 aaKnown RBP25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 OXTRP30559 389 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 GNPDA1P46926 289 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 GK3PQ14409 553 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 IMPG1Q17R60 797 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 PLA2G4EQ3MJ16 856 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 PLEKHS1Q5SXH7 462 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 TTC23LQ6PF05 361 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 ADGRG5Q8IZF4 528 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 ZNF597Q96LX8 424 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 LRRC3BQ96PB8 259 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 SLC29A1Q99808 456 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 IL36AQ9UHA7 158 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 USP22Q9UPT9 525 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 PLXNA2O75051 1894 aa25.03■■□□□ 1.6
SMARCD3-203ENST00000392811 HNRNPRO43390 633 aaKnown RBP25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 SGTAO43765 313 aa25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 BMP2P12643 396 aa25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 SOX11P35716 441 aa25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 MAD2L1Q13257 205 aaPredicted RBP25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 LRRC70Q7Z2Q7 622 aa25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 TCAIMQ8N3R3 496 aa25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 MTFMTQ96DP5 389 aaKnown RBP25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 PPM1MQ96MI6 270 aa25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 RIOK2Q9BVS4 552 aaKnown RBP25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 LRTM1Q9HBL6 345 aa25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 ZFP14Q9HCL3 533 aa25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 LINC01553A4QN01 128 aa25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 CFAP99D6REC4 459 aa25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 HIST1H2AGP0C0S8 130 aaPredicted RBP25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 HIST1H2ADP20671 130 aa25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 IL10P22301 178 aa25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 DHCR24Q15392 516 aa25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 CPSF6Q16630 551 aaKnown RBP eCLIP25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 POM121L1PQ3SYA9 428 aa25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 HIST1H2AHQ96KK5 128 aa25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 HIST1H2AJQ99878 128 aa25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 H2AFJQ9BTM1 129 aa25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 FBXO10Q9UK96 956 aa25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 SLC8A2Q9UPR5 921 aa25.02■■□□□ 1.6
SMARCD3-203ENST00000392811 TCRBV5S2A0A599 114 aa25.01■■□□□ 1.59
SMARCD3-203ENST00000392811 FADS2P1A8MWK0 482 aa25.01■■□□□ 1.59
SMARCD3-203ENST00000392811 GFYI3L273 518 aa25.01■■□□□ 1.59
SMARCD3-203ENST00000392811 SLC9A3R1O14745 358 aaPredicted RBP25.01■■□□□ 1.59
SMARCD3-203ENST00000392811 PER2O15055 1255 aa25.01■■□□□ 1.59
SMARCD3-203ENST00000392811 INPP4BO15327 924 aa25.01■■□□□ 1.59
SMARCD3-203ENST00000392811 SEC22BO75396 215 aa25.01■■□□□ 1.59
SMARCD3-203ENST00000392811 UBE3AQ05086 875 aa25.01■■□□□ 1.59
SMARCD3-203ENST00000392811 ZNF648Q5T619 568 aaPredicted RBP25.01■■□□□ 1.59
SMARCD3-203ENST00000392811 PRR23BQ6ZRT6 265 aa25.01■■□□□ 1.59
SMARCD3-203ENST00000392811 LIX1Q8N485 282 aa25.01■■□□□ 1.59
SMARCD3-203ENST00000392811 BEND7Q8N7W2 519 aaPredicted RBP25.01■■□□□ 1.59
SMARCD3-203ENST00000392811 ZNF366Q8N895 744 aa25.01■■□□□ 1.59
SMARCD3-203ENST00000392811 ELMO1Q92556 727 aa25.01■■□□□ 1.59
SMARCD3-203ENST00000392811 ZBTB18Q99592 522 aa25.01■■□□□ 1.59
SMARCD3-203ENST00000392811 P2RY13Q9BPV8 354 aa25.01■■□□□ 1.59
SMARCD3-203ENST00000392811 PIF1Q9H611 641 aa25.01■■□□□ 1.59
SMARCD3-203ENST00000392811 PRKAG2Q9UGJ0 569 aa25.01■■□□□ 1.59
SMARCD3-203ENST00000392811 KRT6AP02538 564 aa25■■□□□ 1.59
SMARCD3-203ENST00000392811 KRT6BP04259 564 aa25■■□□□ 1.59
SMARCD3-203ENST00000392811 CYP17A1P05093 508 aa25■■□□□ 1.59
SMARCD3-203ENST00000392811 CKMT2P17540 419 aa25■■□□□ 1.59
SMARCD3-203ENST00000392811 HTR1EP28566 365 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms