RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 CASP3P42574 277 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 SLC1A2P43004 574 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 OR3A3P47888 321 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 SERPINB9P50453 376 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 SNTA1Q13424 505 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 CDK10Q15131 360 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 KIAA0930Q6ICG6 404 aaPredicted RBP18.65■□□□□ 0.58
CCDC50-202ENST00000392456 BNC2Q6ZN30 1099 aaPredicted RBP18.65■□□□□ 0.58
CCDC50-202ENST00000392456 PTAR1Q7Z6K3 402 aaPredicted RBP18.65■□□□□ 0.58
CCDC50-202ENST00000392456 SNX29P2Q8IUI4 249 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 TMEM102Q8N9M5 508 aaPredicted RBP18.65■□□□□ 0.58
CCDC50-202ENST00000392456 ABHD11Q8NFV4 315 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 CYB5D2Q8WUJ1 264 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 TM9SF2Q99805 663 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 KCNN2Q9H2S1 579 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 ZNF576Q9H609 170 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 AKIP1Q9NQ31 210 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 DZANK1Q9NVP4 752 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 MARK1Q9P0L2 795 aa18.65■□□□□ 0.58
CCDC50-202ENST00000392456 FZD6O60353 706 aa18.64■□□□□ 0.58
CCDC50-202ENST00000392456 NOL3O60936 208 aaKnown RBP18.64■□□□□ 0.58
CCDC50-202ENST00000392456 PRSS56P0CW18 603 aa18.64■□□□□ 0.58
CCDC50-202ENST00000392456 RPL10P27635 214 aaKnown RBP18.64■□□□□ 0.58
CCDC50-202ENST00000392456 MRPS22P82650 360 aaKnown RBP18.64■□□□□ 0.58
CCDC50-202ENST00000392456 SELPLGQ14242 412 aa18.64■□□□□ 0.58
CCDC50-202ENST00000392456 CLVS2Q5SYC1 327 aa18.64■□□□□ 0.58
CCDC50-202ENST00000392456 ATG16L1Q676U5 607 aa18.64■□□□□ 0.58
CCDC50-202ENST00000392456 ZNF470Q6ECI4 717 aa18.64■□□□□ 0.58
CCDC50-202ENST00000392456 CHRDL2Q6WN34 429 aa18.64■□□□□ 0.58
CCDC50-202ENST00000392456 MFSD6LQ8IWD5 586 aa18.64■□□□□ 0.58
CCDC50-202ENST00000392456 BPIFB1Q8TDL5 484 aa18.64■□□□□ 0.58
CCDC50-202ENST00000392456 CHAC2Q8WUX2 184 aa18.64■□□□□ 0.58
CCDC50-202ENST00000392456 OTUB2Q96DC9 234 aa18.64■□□□□ 0.58
CCDC50-202ENST00000392456 CPNE5Q9HCH3 593 aa18.64■□□□□ 0.58
CCDC50-202ENST00000392456 MARCH4Q9P2E8 410 aaPredicted RBP18.64■□□□□ 0.58
CCDC50-202ENST00000392456 HS3ST2Q9Y278 367 aa18.64■□□□□ 0.58
CCDC50-202ENST00000392456 PLOD2O00469 737 aa18.64■□□□□ 0.57
CCDC50-202ENST00000392456 LIMK2P53671 638 aa18.64■□□□□ 0.57
CCDC50-202ENST00000392456 AQP5P55064 265 aa18.64■□□□□ 0.57
CCDC50-202ENST00000392456 NAB1Q13506 487 aa18.64■□□□□ 0.57
CCDC50-202ENST00000392456 SLC12A1Q13621 1099 aa18.64■□□□□ 0.57
CCDC50-202ENST00000392456 LDLRAP1Q5SW96 308 aa18.64■□□□□ 0.57
CCDC50-202ENST00000392456 GRTP1Q5TC63 336 aa18.64■□□□□ 0.57
CCDC50-202ENST00000392456 SLC22A16Q86VW1 577 aa18.64■□□□□ 0.57
CCDC50-202ENST00000392456 TNS4Q8IZW8 715 aa18.64■□□□□ 0.57
CCDC50-202ENST00000392456 NDUFAF2Q8N183 169 aa18.64■□□□□ 0.57
CCDC50-202ENST00000392456 OR6P1Q8NGX9 317 aa18.64■□□□□ 0.57
CCDC50-202ENST00000392456 CNDP2Q96KP4 475 aaKnown RBP18.64■□□□□ 0.57
CCDC50-202ENST00000392456 ACAT2Q9BWD1 397 aa18.64■□□□□ 0.57
CCDC50-202ENST00000392456 ANKRD60Q9BZ19 345 aa18.64■□□□□ 0.57
CCDC50-202ENST00000392456 MTG2Q9H4K7 406 aa18.64■□□□□ 0.57
CCDC50-202ENST00000392456 ENPP5Q9UJA9 477 aa18.64■□□□□ 0.57
CCDC50-202ENST00000392456 ANTXRLA6NF34 631 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 NADKO95544 446 aaPredicted RBP18.63■□□□□ 0.57
CCDC50-202ENST00000392456 ALPIP09923 528 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 CISD3P0C7P0 127 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 CTPS1P17812 591 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 EVI2BP34910 448 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 SLC6A11P48066 632 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 SLC14A2Q15849 920 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 ZC3HC1Q86WB0 502 aaKnown RBP18.63■□□□□ 0.57
CCDC50-202ENST00000392456 ZSWIM9Q86XI8 627 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 ARMC8Q8IUR7 673 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 SFTPA1Q8IWL2 248 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 CNTN4Q8IWV2 1026 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 TOE1Q96GM8 510 aaKnown RBP18.63■□□□□ 0.57
CCDC50-202ENST00000392456 MYADMQ96S97 322 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 PLA2G2FQ9BZM2 168 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 TEX51A0A1B0GUA7 166 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 ADH5P11766 374 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 HK2P52789 917 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 ADAM15Q13444 863 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 GRM3Q14832 879 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 NRF1Q16656 503 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 GAB4Q2WGN9 574 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 MBLAC2Q68D91 279 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 TIFABQ6ZNK6 161 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 ADGRG5Q8IZF4 528 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 RYBPQ8N488 228 aaPredicted RBP18.63■□□□□ 0.57
CCDC50-202ENST00000392456 EID2BQ96D98 161 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 VPS39Q96JC1 886 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 STN1Q9H668 368 aaKnown RBP18.63■□□□□ 0.57
CCDC50-202ENST00000392456 ATP13A3Q9H7F0 1226 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 DCAF16Q9NXF7 216 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 FBXO10Q9UK96 956 aa18.63■□□□□ 0.57
CCDC50-202ENST00000392456 NDUFA2O43678 99 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 PAPSS2O95340 614 aaPredicted RBP18.62■□□□□ 0.57
CCDC50-202ENST00000392456 SEMG2Q02383 582 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 ZNF600Q6ZNG1 722 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 FKBP9P1Q75LS8 142 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 KIAA0907Q7Z7F0 614 aaPredicted RBP18.62■□□□□ 0.57
CCDC50-202ENST00000392456 OR2AP1Q8NGE2 309 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 GRPEL2Q8TAA5 225 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 PIH1D2Q8WWB5 315 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 RILPQ96NA2 401 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 FAM83CQ9BQN1 747 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 C1QTNF7Q9BXJ2 289 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 IGSF5Q9NSI5 407 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 ZNF358Q9NW07 568 aa18.62■□□□□ 0.57
CCDC50-202ENST00000392456 NUP210Q8TEM1 1887 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms