RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 PADI2Q9Y2J8 665 aa2.95□□□□□ -1.94
PTPRC-205ENST00000391970 PCDHGB1Q9Y5G3 927 aa2.95□□□□□ -1.94
PTPRC-205ENST00000391970 SOS1Q07889 1333 aaPredicted RBP2.94□□□□□ -1.94
PTPRC-205ENST00000391970 TRIP12Q14669 1992 aaPredicted RBP2.94□□□□□ -1.94
PTPRC-205ENST00000391970 A0A087WV48 116 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 A0A1W2PPI3 338 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 SMTNL1A8MU46 457 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 CLDN4O14493 209 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 CTSVO60911 334 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 WDPCPO95876 746 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 IGHV4-39P01824 125 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 FGF3P11487 239 aaPredicted RBP2.94□□□□□ -1.94
PTPRC-205ENST00000391970 EEF1B2P24534 225 aaKnown RBP2.94□□□□□ -1.94
PTPRC-205ENST00000391970 ASCL1P50553 236 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 ZNF132P52740 706 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 THOP1P52888 689 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 TERF1P54274 439 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 EEF1A2Q05639 463 aaKnown RBP2.94□□□□□ -1.94
PTPRC-205ENST00000391970 MBTD1Q05BQ5 628 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 MZT1Q08AG7 82 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 BFSP1Q12934 665 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 KIR2DS3Q14952 304 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 ZNF585BQ52M93 769 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 CCDC184Q52MB2 194 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 ASPRV1Q53RT3 343 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 MDH1BQ5I0G3 518 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 C1QTNF12Q5T7M4 302 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 CAVIN1Q6NZI2 390 aaKnown RBP2.94□□□□□ -1.94
PTPRC-205ENST00000391970 ZNF852Q6ZMS4 543 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 KCTD8Q6ZWB6 473 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 ADCK2Q7Z695 626 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 DNAJB7Q7Z6W7 309 aaPredicted RBP2.94□□□□□ -1.94
PTPRC-205ENST00000391970 GLRX5Q86SX6 157 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 TMPRSS11BQ86T26 416 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 DCP1BQ8IZD4 617 aaKnown RBP2.94□□□□□ -1.94
PTPRC-205ENST00000391970 OR8H3Q8N146 312 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 CCAR2Q8N163 923 aaKnown RBP2.94□□□□□ -1.94
PTPRC-205ENST00000391970 ARHGAP24Q8N264 748 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 TRIML1Q8N9V2 468 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 LMO3Q8TAP4 145 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 SPATA20Q8TB22 786 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 SETD6Q8TBK2 473 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 RNF128Q8TEB7 428 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 DEPDC1BQ8WUY9 529 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 SYN2Q92777 582 aaPredicted RBP2.94□□□□□ -1.94
PTPRC-205ENST00000391970 EXT2Q93063 718 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 FAM162AQ96A26 154 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 MOB3AQ96BX8 217 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 DHX58Q96C10 678 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 RMDN2Q96LZ7 410 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 FEVQ99581 238 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 CPNE1Q99829 537 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 MGME1Q9BQP7 344 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 ARRDC1-AS1Q9H2J1 176 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 FZD8Q9H461 694 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 APOBEC3GQ9HC16 384 aaKnown RBP2.94□□□□□ -1.94
PTPRC-205ENST00000391970 TCF7L2Q9NQB0 619 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 CPSF3Q9UKF6 684 aaKnown RBP2.94□□□□□ -1.94
PTPRC-205ENST00000391970 RNF150Q9ULK6 438 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 NOL7Q9UMY1 257 aaKnown RBP2.94□□□□□ -1.94
PTPRC-205ENST00000391970 TNFRSF18Q9Y5U5 241 aa2.94□□□□□ -1.94
PTPRC-205ENST00000391970 FLT1P17948 1338 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 A0A1B0GUV1 79 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 NEMP2A6NFY4 417 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 ANXA2P2A6NMY6 339 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 GAPDHSO14556 408 aaPredicted RBP2.93□□□□□ -1.94
PTPRC-205ENST00000391970 ACOT8O14734 319 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 CLIC2O15247 247 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 KCNAB3O43448 404 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 SYNCRIPO60506 623 aaKnown RBP2.93□□□□□ -1.94
PTPRC-205ENST00000391970 ACSL3O95573 720 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 IGHV2-70P01814 119 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 CD22P20273 847 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 DGKAP23743 735 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 AZGP1P25311 298 aaKnown RBP2.93□□□□□ -1.94
PTPRC-205ENST00000391970 SLC6A6P31641 620 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 LHX1P48742 406 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 FMO5P49326 533 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 HOXA1P49639 335 aaPredicted RBP2.93□□□□□ -1.94
PTPRC-205ENST00000391970 MAPK12P53778 367 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 RPS18P62269 152 aaKnown RBP2.93□□□□□ -1.94
PTPRC-205ENST00000391970 POLR2LP62875 67 aaKnown RBP2.93□□□□□ -1.94
PTPRC-205ENST00000391970 KRT83P78385 493 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 CX3CL1P78423 397 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 MAT1AQ00266 395 aaKnown RBP2.93□□□□□ -1.94
PTPRC-205ENST00000391970 GLIPR1L2Q4G1C9 344 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 SYT14P1Q58G82 188 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 C6orf136Q5SQH8 315 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 PDSS1Q5T2R2 415 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 CAPRIN2Q6IMN6 1127 aaKnown RBP2.93□□□□□ -1.94
PTPRC-205ENST00000391970 MFSD12Q6NUT3 480 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 SPSB3Q6PJ21 355 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 PET117Q6UWS5 81 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 FOXL2NBQ6ZUU3 175 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 TLK2Q86UE8 772 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 COMMD2Q86X83 199 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 KBTBD3Q8NAB2 608 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 POC1AQ8NBT0 407 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 FGFBP3Q8TAT2 258 aa2.93□□□□□ -1.94
PTPRC-205ENST00000391970 SSMEM1Q8WWF3 244 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms