RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 SLC25A52Q3SY17 297 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 PRSS36Q5K4E3 855 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 DENND5AQ6IQ26 1287 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 TMEM207Q6UWW9 146 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 PDZD4Q76G19 769 aaPredicted RBP14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 CCDC190Q86UF4 302 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 GTF3C2Q8WUA4 911 aaPredicted RBP14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 SLC47A1Q96FL8 570 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 SIGLEC11Q96RL6 698 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 OSMRQ99650 979 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 OR5K3A6NET4 321 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 FAM72CH0Y354 149 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 JCHAINP01591 159 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 SERPINF2P08697 491 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 PPP3CCP48454 512 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 SCNN1GP51170 649 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 SLAMF1Q13291 335 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 SIM2Q14190 667 aaPredicted RBP14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 ESCO2Q56NI9 601 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 FAM72AQ5TYM5 149 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 OTUD1Q5VV17 481 aaPredicted RBP14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 FAM72DQ6L9T8 149 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 CAPN13Q6MZZ7 669 aaPredicted RBP14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 ARHGAP36Q6ZRI8 547 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 GALNT5Q7Z7M9 940 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 FAM72BQ86X60 149 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 ADHFE1Q8IWW8 467 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 DEFB106AQ8N104 65 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 FBXL6Q8N531 539 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 DPP10Q8N608 796 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 NPWQ8N729 165 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 LINC01465Q8N7H1 131 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 C18orf25Q96B23 403 aaPredicted RBP14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 RHBDF1Q96CC6 855 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 ZNF583Q96ND8 569 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 CCDC32Q9BV29 185 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 ENTPD7Q9NQZ7 604 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 ERVK13-1Q9NX77 482 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 LIMD1Q9UGP4 676 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 HSPE1-MOB4S4R3N1 261 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 SYNJ2BP-COX16A0A087WUM0 186 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 M0R082 166 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 NCAM2O15394 837 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 FAM20BO75063 409 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 CPNE3O75131 537 aaKnown RBP14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 UGT2B17O75795 530 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 TSPAN9O75954 239 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 MMP3P08254 477 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 GLULP15104 373 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 SLC26A3P40879 764 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 UGT2B15P54855 530 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 HTRA3P83110 453 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 TAGLNQ01995 201 aaKnown RBP14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 CCL14Q16627 93 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 GPAT3Q53EU6 434 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 SYCE2Q6PIF2 218 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 PTGR2Q8N8N7 351 aaPredicted RBP14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 SETD6Q8TBK2 473 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 PEX13Q92968 403 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 OMA1Q96E52 524 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 CCDC115Q96NT0 180 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 NSUN5Q96P11 429 aaKnown RBP14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 BRINP2Q9C0B6 783 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 KLK14Q9P0G3 267 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 COX16Q9P0S2 106 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 CDH9Q9ULB4 789 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 NME7Q9Y5B8 376 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 PCDHGB2Q9Y5G2 931 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 LYVE1Q9Y5Y7 322 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 FAM234BA2RU67 622 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 TMEM88BA6NKF7 163 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 SNTNA6NMZ2 147 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 AKAP5P24588 427 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 PRIM2P49643 509 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 GPR158Q5T848 1215 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 CYP4Z1Q86W10 505 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 CACTIN-AS1Q8N1I8 211 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 TCAIMQ8N3R3 496 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 PPHLN1Q8NEY8 458 aaKnown RBP14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 TOR1AIP2Q8NFQ8 470 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 SPATA22Q8NHS9 363 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 ZFAND1Q8TCF1 268 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 GIPC2Q8TF65 315 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 PTERQ96BW5 349 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 TMCO6Q96DC7 493 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 TSPAN17Q96FV3 270 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 MRPL45Q9BRJ2 306 aaKnown RBP14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 AIFM2Q9BRQ8 373 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 FAM124BQ9H5Z6 455 aaPredicted RBP14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 TREX1Q9NSU2 369 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 ADGRE2Q9UHX3 823 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 PKP3Q9Y446 797 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 FNDC1Q4ZHG4 1894 aaPredicted RBP14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 NUP205Q92621 2012 aa14.39□□□□□ -0.11
VPS9D1-201ENST00000389386 A0A1B0GTL3 188 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 TEX51A0A1B0GUA7 166 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 CAPN1P07384 714 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 CBLP22681 906 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 GRK5P34947 590 aa14.38□□□□□ -0.11
VPS9D1-201ENST00000389386 RPS5P46782 204 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms