RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 MSL3P1P0C860 447 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 ART1P52961 327 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 ADORA2A-AS1P86434 159 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 TMPRSS15P98073 1019 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 SLC25A11Q02978 314 aaKnown RBP9.3□□□□□ -0.92
IFT88-203ENST00000389373 SLC10A2Q12908 348 aaPredicted RBP9.3□□□□□ -0.92
IFT88-203ENST00000389373 PRKG2Q13237 762 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 MFAP5Q13361 173 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 RBBP7Q16576 425 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 HADHQ16836 314 aaKnown RBP9.3□□□□□ -0.92
IFT88-203ENST00000389373 KIRREL2Q6UWL6 708 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 SLC25A41Q8N5S1 370 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 C19orf47Q8N9M1 422 aaKnown RBP9.3□□□□□ -0.92
IFT88-203ENST00000389373 ANKRD20A12PQ8NF67 263 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 OR2L2Q8NH16 312 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 FATE1Q969F0 183 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 ZNF830Q96NB3 372 aaPredicted RBP9.3□□□□□ -0.92
IFT88-203ENST00000389373 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.3□□□□□ -0.92
IFT88-203ENST00000389373 HAUS4Q9H6D7 363 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 FANCLQ9NW38 375 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 PTGFRNQ9P2B2 879 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 PCDHGB6Q9Y5F9 930 aa9.3□□□□□ -0.92
IFT88-203ENST00000389373 SETD2Q9BYW2 2564 aaPredicted RBP9.29□□□□□ -0.92
IFT88-203ENST00000389373 CELSR1Q9NYQ6 3014 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 CCDC88CQ9P219 2028 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 DDX3XO00571 662 aaKnown RBP eCLIP9.29□□□□□ -0.921e-6■■■□□ 16.8
IFT88-203ENST00000389373 CLDN14O95500 239 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 GZMAP12544 262 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 CDK11BP21127 795 aaKnown RBP9.29□□□□□ -0.92
IFT88-203ENST00000389373 MST1P26927 711 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 UBE2HP62256 183 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 ITGA9Q13797 1035 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 CDSNQ15517 529 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 ZIC1Q15915 447 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 C3AR1Q16581 482 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 CDKAL1Q5VV42 579 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 TLDC1Q6P9B6 456 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 SPESP1Q6UW49 350 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 TTLL10Q6ZVT0 673 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 ZNF571Q7Z3V5 609 aaPredicted RBP9.29□□□□□ -0.92
IFT88-203ENST00000389373 AMIGO1Q86WK6 493 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 ADGRF3Q8IZF5 1079 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 DDHD1Q8NEL9 900 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 OR52E1Q8NGJ3 308 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 CCDC110Q8TBZ0 833 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 ENOX1Q8TC92 643 aaKnown RBP9.29□□□□□ -0.92
IFT88-203ENST00000389373 TRIM11Q96F44 468 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 C14orf79Q96F83 325 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 IMP4Q96G21 291 aaKnown RBP9.29□□□□□ -0.92
IFT88-203ENST00000389373 LMF1Q96S06 567 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 SRPK1Q96SB4 655 aaKnown RBP9.29□□□□□ -0.92
IFT88-203ENST00000389373 CCM2Q9BSQ5 444 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 SYT11Q9BT88 431 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 HGH1Q9BTY7 390 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 PITPNM3Q9BZ71 974 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 MCCC2Q9HCC0 563 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 SEMA3GQ9NS98 782 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 SLC22A11Q9NSA0 550 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 IP6K2Q9UHH9 426 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 ANAPC7Q9UJX3 599 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 HEY1Q9Y5J3 304 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 HS3ST3B1Q9Y662 390 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 ITPR3Q14573 2671 aa9.29□□□□□ -0.92
IFT88-203ENST00000389373 TRAV17A0A0B4J275 112 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 LRRC53A6NM62 1247 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 LGALS16A8MUM7 142 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 IFRD1O00458 451 aaPredicted RBP9.28□□□□□ -0.92
IFT88-203ENST00000389373 RASAL1O95294 804 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 CRYABP02511 175 aaKnown RBP9.28□□□□□ -0.92
IFT88-203ENST00000389373 MYBL1P10243 752 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 PIM1P11309 404 aaPredicted RBP9.28□□□□□ -0.92
IFT88-203ENST00000389373 SKILP12757 684 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 HMGCLP35914 325 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 TNNT3P45378 269 aaPredicted RBP9.28□□□□□ -0.92
IFT88-203ENST00000389373 ARSEP51690 589 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 IFI35P80217 286 aaPredicted RBP9.28□□□□□ -0.92
IFT88-203ENST00000389373 PTPRCAPQ14761 206 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 ZDHHC20Q5W0Z9 365 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 SARM1Q6SZW1 724 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 MEX3BQ6ZN04 569 aaKnown RBP9.28□□□□□ -0.92
IFT88-203ENST00000389373 NCCRP1Q6ZVX7 275 aaPredicted RBP9.28□□□□□ -0.92
IFT88-203ENST00000389373 OVCH1Q7RTY7 1134 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 GLT6D1Q7Z4J2 308 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 FAM20CQ8IXL6 584 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 PRSS58Q8IYP2 241 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 SIRT6Q8N6T7 355 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 ZNF398Q8TD17 642 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 BLOC1S5Q8TDH9 187 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.28□□□□□ -0.92
IFT88-203ENST00000389373 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.28□□□□□ -0.92
IFT88-203ENST00000389373 DCUN1D1Q96GG9 259 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 VPS50Q96JG6 964 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 SLC25A51Q9H1U9 297 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 ZNF160Q9HCG1 818 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.28□□□□□ -0.92
IFT88-203ENST00000389373 IL17CQ9P0M4 197 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 TINAGQ9UJW2 476 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 PKP3Q9Y446 797 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 SVILO95425 2214 aa9.28□□□□□ -0.92
IFT88-203ENST00000389373 ZFHX3Q15911 3703 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms