RNA–Protein interactions for RNA: ENST00000384433.1

RNU6-549P-201, Transcript of RNA, U6 small nuclear 549, pseudogene, humanhuman

BASIC

Gene RNU6-549P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-549P-201ENST00000384433 MR1Q95460 341 aa4.31□□□□□ -1.72
RNU6-549P-201ENST00000384433 LRRC3BQ96PB8 259 aa4.31□□□□□ -1.72
RNU6-549P-201ENST00000384433 TMEM204Q9BSN7 226 aa4.31□□□□□ -1.72
RNU6-549P-201ENST00000384433 TRAF4Q9BUZ4 470 aaPredicted RBP4.31□□□□□ -1.72
RNU6-549P-201ENST00000384433 TUBB2BQ9BVA1 445 aa4.31□□□□□ -1.72
RNU6-549P-201ENST00000384433 TM6SF1Q9BZW5 370 aa4.31□□□□□ -1.72
RNU6-549P-201ENST00000384433 EBF2Q9HAK2 575 aa4.31□□□□□ -1.72
RNU6-549P-201ENST00000384433 PFDN4Q9NQP4 134 aa4.31□□□□□ -1.72
RNU6-549P-201ENST00000384433 MTUS1Q9ULD2 1270 aa4.31□□□□□ -1.72
RNU6-549P-201ENST00000384433 CKAP5Q14008 2032 aa4.31□□□□□ -1.72
RNU6-549P-201ENST00000384433 PCDH11YQ9BZA8 1340 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 A0A1W2PPK0 400 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 NEMP2A6NFY4 417 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 ANXA2P2A6NMY6 339 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 H0Y626 953 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 SLC28A2O43868 658 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 BAG4O95429 457 aaKnown RBP4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 ZFYP08048 801 aaPredicted RBP4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 JAK1P23458 1154 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 AHRP35869 848 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 SLC9A3P48764 834 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 CAPZA1P52907 286 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 KRT83P78385 493 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 MAT1AQ00266 395 aaKnown RBP4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 ITGA7Q13683 1181 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 SYT14P1Q58G82 188 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 C6orf136Q5SQH8 315 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 PLEKHM3Q6ZWE6 761 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 ANO5Q75V66 913 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 ARHGAP22Q7Z5H3 698 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 SPATA19Q7Z5L4 167 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 ABI3BPQ7Z7G0 1075 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 TLK2Q86UE8 772 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 LONP2Q86WA8 852 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 MUC20Q8N307 709 aaPredicted RBP4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 TTC30BQ8N4P2 665 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 SSMEM1Q8WWF3 244 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 CORO2AQ92828 525 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 EXOC4Q96A65 974 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 STAMBPL1Q96FJ0 436 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 C17orf77Q96MU5 243 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 IL17FQ96PD4 163 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 SEPHS2Q99611 448 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 CITED2Q99967 270 aaPredicted RBP4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 C1QTNF4Q9BXJ3 329 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 DDX31Q9H8H2 851 aaKnown RBP4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 DNAJC4Q9NNZ3 241 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 POLLQ9UGP5 575 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 CPSF3Q9UKF6 684 aaKnown RBP4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 POU2F3Q9UKI9 436 aa4.3□□□□□ -1.72
RNU6-549P-201ENST00000384433 ENO4A6NNW6 628 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 C15orf62A8K5M9 175 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 LACTBL1A8MY62 500 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 E9PI62 339 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 CCDC188H7C350 402 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 BUD23O43709 281 aaKnown RBP4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 CTSVO60911 334 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 IGHV2-70P01814 119 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 CSN3P07498 182 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 FAM58BPP0C7Q3 252 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 CCKBRP32239 447 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 BMXP51813 675 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 B3GALT5-AS1P59052 145 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 PTENP60484 403 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 ZXDBP98169 803 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 EEF1A2Q05639 463 aaKnown RBP4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 ZNF415Q09FC8 603 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 NFE2L1Q14494 772 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 DUOXA1Q1HG43 343 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 TCTE1Q5JU00 501 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 SPDYCQ5MJ68 293 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 PACS1Q6VY07 963 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 KCTD8Q6ZWB6 473 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 TUBA1AQ71U36 451 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 CFAP206Q8IYR0 622 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 MAML2Q8IZL2 1156 aaPredicted RBP4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 SIX6OS1Q8N1H7 587 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 CIARTQ8N365 385 aaPredicted RBP4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 ZNF843Q8N446 348 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 Q8N9P0 234 aaPredicted RBP4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 TRIML1Q8N9V2 468 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 ST6GALNAC6Q969X2 333 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 SPATA33Q96N06 139 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 RAD9AQ99638 391 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 TUBA1CQ9BQE3 449 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 KRTAP4-5Q9BYR2 181 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 SLC2A11Q9BYW1 496 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 S1PR5Q9H228 398 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 ARRDC1-AS1Q9H2J1 176 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 HIPK2Q9H2X6 1198 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 A4GALTQ9NPC4 353 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 SERINC1Q9NRX5 453 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 TBC1D7Q9P0N9 293 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 TMED3Q9Y3Q3 217 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 GRIP1Q9Y3R0 1128 aa4.29□□□□□ -1.72
RNU6-549P-201ENST00000384433 HEG1Q9ULI3 1381 aa4.28□□□□□ -1.72
RNU6-549P-201ENST00000384433 MED19A0JLT2 244 aaPredicted RBP4.28□□□□□ -1.72
RNU6-549P-201ENST00000384433 A4D1N5 150 aa4.28□□□□□ -1.72
RNU6-549P-201ENST00000384433 H0YAE9 185 aa4.28□□□□□ -1.72
RNU6-549P-201ENST00000384433 CLDN4O14493 209 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms