RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 RPL5P46777 297 aaKnown RBP7.59□□□□□ -1.19
CDKL5-202ENST00000379996 SOX9P48436 509 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 HSPA13P48723 471 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 FOXA1P55317 472 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 MAXP61244 160 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 CTBSQ01459 385 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 PON2Q15165 354 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 TAF1AQ15573 450 aaPredicted RBP7.59□□□□□ -1.19
CDKL5-202ENST00000379996 FNDC3BQ53EP0 1204 aaKnown RBP7.59□□□□□ -1.19
CDKL5-202ENST00000379996 COQ5Q5HYK3 327 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 ARMC12Q5T9G4 340 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 FAM46CQ5VWP2 391 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 TPRG1Q6ZUI0 275 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 USP30Q70CQ3 517 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 NLRP8Q86W28 1048 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 ZNF513Q8N8E2 541 aaPredicted RBP7.59□□□□□ -1.19
CDKL5-202ENST00000379996 MFSD2AQ8NA29 543 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 OR2T3Q8NH03 318 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 RHEBL1Q8TAI7 183 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 BRSK1Q8TDC3 778 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 ROPN1LQ96C74 230 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 SCRN2Q96FV2 425 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 PPP1R16AQ96I34 528 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 SLC29A1Q99808 456 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 ZCCHC2Q9C0B9 1178 aaKnown RBP7.59□□□□□ -1.19
CDKL5-202ENST00000379996 CIPCQ9C0C6 399 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 LTB4R2Q9NPC1 389 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 NDUFA13Q9P0J0 144 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 ZNF639Q9UID6 485 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 ZNF225Q9UK10 706 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 PCDHA9Q9Y5H5 950 aa7.59□□□□□ -1.19
CDKL5-202ENST00000379996 KANSL1LA0AUZ9 987 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 PLOD2O00469 737 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 NME4O00746 187 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 ACOX3O15254 700 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 ADAM23O75077 832 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 ATG13O75143 517 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 CDK14O94921 469 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 CELA3AP09093 270 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 HSD17B1P14061 328 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 ETS2P15036 469 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 ZNF37AP17032 561 aaPredicted RBP7.58□□□□□ -1.2
CDKL5-202ENST00000379996 HOXA6P31267 233 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 RECQLP46063 649 aaPredicted RBP7.58□□□□□ -1.2
CDKL5-202ENST00000379996 SCNN1BP51168 640 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 ZNF140P52738 457 aaPredicted RBP7.58□□□□□ -1.2
CDKL5-202ENST00000379996 DCDC1P59894 354 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 ZXDAP98168 799 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 CSHL1Q14406 222 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 TMEM52BQ4KMG9 183 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 DHRS4L2Q6PKH6 230 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 Q6ZVU0 165 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 DPPA4Q7L190 304 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 SYT13Q7L8C5 426 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 GOLM1Q8NBJ4 401 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 PAPD5Q8NDF8 572 aaKnown RBP7.58□□□□□ -1.2
CDKL5-202ENST00000379996 OR9I1Q8NGQ6 314 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 ZUFSPQ96AP4 578 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 DGCR14Q96DF8 476 aaKnown RBP7.58□□□□□ -1.2
CDKL5-202ENST00000379996 RPL10LQ96L21 214 aaKnown RBP7.58□□□□□ -1.2
CDKL5-202ENST00000379996 FAM126AQ9BYI3 521 aaPredicted RBP7.58□□□□□ -1.2
CDKL5-202ENST00000379996 RAD18Q9NS91 495 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 FZD4Q9ULV1 537 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 A0A1W2PQF6 199 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 C1QTNF3-AMACRE9PGA6 284 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 PSMD12O00232 456 aaPredicted RBP7.58□□□□□ -1.2
CDKL5-202ENST00000379996 PPP6CO00743 305 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 TNFAIP8O95379 198 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 PGM3O95394 542 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 TSPAN12O95859 305 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 CCDC166P0CW27 439 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 ENO3P13929 434 aaPredicted RBP7.58□□□□□ -1.2
CDKL5-202ENST00000379996 CAPN3P20807 821 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 C5AR1P21730 350 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 PCSK6P29122 969 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 SLC5A2P31639 672 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 SFSWAPQ12872 951 aaKnown RBP7.58□□□□□ -1.2
CDKL5-202ENST00000379996 ATXN7L2Q5T6C5 722 aaPredicted RBP7.58□□□□□ -1.2
CDKL5-202ENST00000379996 PPP4R4Q6NUP7 873 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 PTRH1Q86Y79 214 aaKnown RBP7.58□□□□□ -1.2
CDKL5-202ENST00000379996 SLC22A9Q8IVM8 553 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 SFTPA1Q8IWL2 248 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 MINDY1Q8N5J2 469 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 RNF148Q8N7C7 305 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 GRIN3AQ8TCU5 1115 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 ASB12Q8WXK4 309 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 LRTOMTQ8WZ04 291 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 SCYL1Q96KG9 808 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 SRA1Q9HD15 236 aaKnown RBP7.58□□□□□ -1.2
CDKL5-202ENST00000379996 SPAG4Q9NPE6 437 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 SDR39U1Q9NRG7 319 aaPredicted RBP7.58□□□□□ -1.2
CDKL5-202ENST00000379996 AGPAT4Q9NRZ5 378 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 KCTD5Q9NXV2 234 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 VWA7Q9Y334 891 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 TRAF6Q9Y4K3 522 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 KCTD3Q9Y597 815 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 KRBA1A5PL33 1030 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 BBIP1A8MTZ0 92 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 H3BNH8 94 aa7.58□□□□□ -1.2
CDKL5-202ENST00000379996 PMPCBO75439 489 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms