RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 EFNA1P20827 205 aaPredicted RBP13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 ERVFC1P60507 584 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 LIPEQ05469 1076 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 C2orf80Q0P641 193 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 GLYATQ6IB77 296 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 FRMD7Q6ZUT3 714 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 GPR141Q7Z602 305 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 AADATQ8N5Z0 425 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 HMGB4Q8WW32 186 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 CEP19Q96LK0 163 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 SLC2A11Q9BYW1 496 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 RAD21L1Q9H4I0 556 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 SLC32A1Q9H598 525 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 S100A14Q9HCY8 104 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 PRKAG3Q9UGI9 489 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 COQ6Q9Y2Z9 468 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 PRKAB1Q9Y478 270 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 CFAP20Q9Y6A4 193 aaKnown RBP13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 TIPRLO75663 272 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 PAK4O96013 591 aaPredicted RBP13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 ANXA6P08133 673 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 AQP1P29972 269 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 PREPP48147 710 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 FGD3Q5JSP0 725 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 ZNF678Q5SXM1 525 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 CCNYL2Q5T2Q4 361 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 TRIM73Q86UV7 250 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 OR4F6Q8NGB9 312 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 ARRDC2Q8TBH0 407 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 SMIM14Q96QK8 99 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 FAM192AQ9GZU8 254 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 KLHL25Q9H0H3 589 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 DPEP2Q9H4A9 486 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 REEP1Q9H902 201 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 PREBQ9HCU5 417 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 SOHLH2Q9NX45 425 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 H2AFY2Q9P0M6 372 aaPredicted RBP13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 C6orf203Q9P0P8 240 aaPredicted RBP13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 LOC730098B7Z3J9 87 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 B4GALT3O60512 393 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 INPP1P49441 399 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 MANFP55145 182 aaKnown RBP13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 RPS14P62263 151 aaKnown RBP13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 NFKB2Q00653 900 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 FOLH1Q04609 750 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 ZIK1Q3SY52 487 aaPredicted RBP13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 CYP2U1Q7Z449 544 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 DDHD1Q8NEL9 900 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 LCN9Q8WX39 176 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 PROX1Q92786 737 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 PALMDQ9NP74 551 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 RBMX2Q9Y388 322 aaKnown RBP13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 MT-ND1P03886 318 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 HOXB2P14652 356 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 RPL10P27635 214 aaKnown RBP13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 CLCNKAP51800 687 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 CHN2P52757 468 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 SKP1P63208 163 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 TMEM115Q12893 351 aaPredicted RBP13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 ANXA8L1Q5VT79 327 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 CYP4V2Q6ZWL3 525 aaPredicted RBP13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 CCM2Q9BSQ5 444 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 EXOSC4Q9NPD3 245 aaKnown RBP13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 PPM1HQ9ULR3 514 aa13.91□□□□□ -0.18
SHROOM1-203ENST00000378679 CD1DP15813 335 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 ACTR1BP42025 376 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 ASMTP46597 345 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 NEK2P51955 445 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 ACTR1AP61163 376 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 TNK2Q07912 1038 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 DCTN2Q13561 401 aaKnown RBP13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 ELAVL3Q14576 367 aaKnown RBP13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 UBXN2BQ14CS0 331 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 ATP13A5Q4VNC0 1218 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 ZNF534Q76KX8 674 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 OLIG1Q8TAK6 271 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 NSUN5Q96P11 429 aaKnown RBP13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 CARS2Q9HA77 564 aaKnown RBP13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 TMA7Q9Y2S6 64 aaKnown RBP13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 TMEM98Q9Y2Y6 226 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 LRRC14BA6NHZ5 514 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 WFS1O76024 890 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 KAT7O95251 611 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 BMP10O95393 424 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 PRPS2P11908 318 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 GCAP28676 217 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 ETV4P43268 484 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 CDKN1CP49918 316 aaPredicted RBP13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 AQP4P55087 323 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 B3GNT6Q6ZMB0 384 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 KRT73Q86Y46 540 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 MICU2Q8IYU8 434 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 ZNF655Q8N720 491 aaPredicted RBP13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 RERGQ96A58 199 aaPredicted RBP13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 SCRN2Q96FV2 425 aa13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 RMND5BQ96G75 393 aaPredicted RBP13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 PRICKLE1Q96MT3 831 aaPredicted RBP13.9□□□□□ -0.18
SHROOM1-203ENST00000378679 NKX2-4Q9H2Z4 354 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms