RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 GRTP1Q5TC63 336 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 TTC23LQ6PF05 361 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 TRMT10CQ7L0Y3 403 aaKnown RBP12.89□□□□□ -0.35
CKAP2-202ENST00000378034 SLITRK4Q8IW52 837 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 DCUN1D3Q8IWE4 304 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 CTAGE3PQ8IX95 158 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 GPATCH11Q8N954 259 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 OR5AR1Q8NGP9 310 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 GIMAP7Q8NHV1 300 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 MAGEC3Q8TD91 643 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 LCN9Q8WX39 176 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 NCSTNQ92542 709 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 FAM136AQ96C01 138 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 NDNQ99608 321 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 NUDT22Q9BRQ3 303 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 OGFRQ9NZT2 677 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 ENTPD2Q9Y5L3 495 aa12.89□□□□□ -0.35
CKAP2-202ENST00000378034 MATN2O00339 956 aa12.88□□□□□ -0.35
CKAP2-202ENST00000378034 CASC3O15234 703 aaKnown RBP12.88□□□□□ -0.35
CKAP2-202ENST00000378034 CSF2RBP32927 897 aa12.88□□□□□ -0.35
CKAP2-202ENST00000378034 RGS4P49798 205 aa12.88□□□□□ -0.35
CKAP2-202ENST00000378034 PDX1P52945 283 aa12.88□□□□□ -0.35
CKAP2-202ENST00000378034 CDKN2DP55273 166 aa12.88□□□□□ -0.35
CKAP2-202ENST00000378034 CLDN6P56747 220 aa12.88□□□□□ -0.35
CKAP2-202ENST00000378034 TIAL1Q01085 375 aaKnown RBP eCLIP12.88□□□□□ -0.35
CKAP2-202ENST00000378034 CFHR1Q03591 330 aa12.88□□□□□ -0.35
CKAP2-202ENST00000378034 EIF3IQ13347 325 aaKnown RBP12.88□□□□□ -0.35
CKAP2-202ENST00000378034 KLHL38Q2WGJ6 581 aa12.88□□□□□ -0.35
CKAP2-202ENST00000378034 ACSBG2Q5FVE4 666 aa12.88□□□□□ -0.35
CKAP2-202ENST00000378034 OOSP2Q86WS3 158 aa12.88□□□□□ -0.35
CKAP2-202ENST00000378034 OR52E1Q8NGJ3 308 aa12.88□□□□□ -0.35
CKAP2-202ENST00000378034 SKA2Q8WVK7 121 aaPredicted RBP12.88□□□□□ -0.35
CKAP2-202ENST00000378034 ZDHHC12Q96GR4 267 aa12.88□□□□□ -0.35
CKAP2-202ENST00000378034 LIN37Q96GY3 246 aaPredicted RBP12.88□□□□□ -0.35
CKAP2-202ENST00000378034 RBBP8Q99708 897 aa12.88□□□□□ -0.35
CKAP2-202ENST00000378034 SLC30A3Q99726 388 aa12.88□□□□□ -0.35
CKAP2-202ENST00000378034 ZMYND15Q9H091 742 aa12.88□□□□□ -0.35
CKAP2-202ENST00000378034 SRMSQ9H3Y6 488 aa12.88□□□□□ -0.35
CKAP2-202ENST00000378034 ACSS3Q9H6R3 686 aa12.88□□□□□ -0.35
CKAP2-202ENST00000378034 RDH14Q9HBH5 336 aa12.88□□□□□ -0.35
CKAP2-202ENST00000378034 MN1Q10571 1320 aaPredicted RBP12.88□□□□□ -0.35
CKAP2-202ENST00000378034 FAM95CA0A1B0GW59 222 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 FAM149AA5PLN7 773 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 OR5K3A6NET4 321 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 TOX3O15405 576 aaPredicted RBP12.87□□□□□ -0.35
CKAP2-202ENST00000378034 C9P02748 559 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 TYRP1P17643 537 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 SHMT2P34897 504 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 SPRP35270 261 aaPredicted RBP12.87□□□□□ -0.35
CKAP2-202ENST00000378034 ABCG1P45844 678 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 POU4F1Q01851 419 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 PDAP1Q13442 181 aaKnown RBP12.87□□□□□ -0.35
CKAP2-202ENST00000378034 ZNF574Q6ZN55 896 aaPredicted RBP12.87□□□□□ -0.35
CKAP2-202ENST00000378034 PPM1NQ8N819 430 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 RAD51AP1Q96B01 352 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 VPS39Q96JC1 886 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 ELMO2Q96JJ3 720 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 HGH1Q9BTY7 390 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 NRSN2Q9GZP1 204 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 ANKZF1Q9H8Y5 726 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 POPDC3Q9HBV1 291 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 SPTBN2O15020 2390 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 IGHV5-10-1A0A0J9YXX1 117 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 HGSO14964 777 aaPredicted RBP12.87□□□□□ -0.35
CKAP2-202ENST00000378034 PSIP1O75475 530 aaKnown RBP12.87□□□□□ -0.35
CKAP2-202ENST00000378034 C1orf105O95561 183 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 ABHD2P08910 425 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 THRAP10827 490 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 HOXB3P14651 431 aaPredicted RBP12.87□□□□□ -0.35
CKAP2-202ENST00000378034 MCM3P25205 808 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 PRKG2Q13237 762 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 CAMK2BQ13554 666 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 ARMC6Q6NXE6 501 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 TMPRSS9Q7Z410 1059 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 AMIGO1Q86WK6 493 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 CARFQ8N187 725 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 OR4E2Q8NGC2 313 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 CFAP61Q8NHU2 1237 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 UBXN4Q92575 508 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 RSC1A1Q92681 617 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 TSPAN17Q96FV3 270 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 CD180Q99467 661 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 RAB11FIP5Q9BXF6 653 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 SEMA6CQ9H3T2 930 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 HRASLS2Q9NWW9 162 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 OR6C2Q9NZP2 312 aa12.87□□□□□ -0.35
CKAP2-202ENST00000378034 AKAP7Q9P0M2 348 aaPredicted RBP12.87□□□□□ -0.35
CKAP2-202ENST00000378034 TDRKHQ9Y2W6 561 aaKnown RBP12.87□□□□□ -0.35
CKAP2-202ENST00000378034 A0A087WUV0 522 aaPredicted RBP12.86□□□□□ -0.35
CKAP2-202ENST00000378034 CCDC187A0A096LP49 1063 aa12.86□□□□□ -0.35
CKAP2-202ENST00000378034 CAPN5O15484 640 aaPredicted RBP12.86□□□□□ -0.35
CKAP2-202ENST00000378034 ACSL3O95573 720 aa12.86□□□□□ -0.35
CKAP2-202ENST00000378034 CATP04040 527 aaKnown RBP12.86□□□□□ -0.35
CKAP2-202ENST00000378034 ANKRD34CP0C6C1 535 aa12.86□□□□□ -0.35
CKAP2-202ENST00000378034 SPINK2P20155 84 aa12.86□□□□□ -0.35
CKAP2-202ENST00000378034 PMS2P54278 862 aa12.86□□□□□ -0.35
CKAP2-202ENST00000378034 SLC12A2P55011 1212 aa12.86□□□□□ -0.35
CKAP2-202ENST00000378034 IL2P60568 153 aa12.86□□□□□ -0.35
CKAP2-202ENST00000378034 PRKAA1Q13131 559 aa12.86□□□□□ -0.35
CKAP2-202ENST00000378034 PHF19Q5T6S3 580 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms