RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 MAP2P11137 1827 aaKnown RBP13.49□□□□□ -0.25
COL4A1-201ENST00000375820 CPNE3O75131 537 aaKnown RBP13.49□□□□□ -0.25
COL4A1-201ENST00000375820 AP2A1O95782 977 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 OPN1SWP03999 348 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 ATF4P18848 351 aaPredicted RBP13.49□□□□□ -0.25
COL4A1-201ENST00000375820 CDKN2BP42772 138 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 CAP1Q01518 475 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 ZNF234Q14588 700 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 FUT10Q6P4F1 479 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 PRR23BQ6ZRT6 265 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 MON1BQ7L1V2 547 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 DGCR14Q96DF8 476 aaKnown RBP13.49□□□□□ -0.25
COL4A1-201ENST00000375820 PCDHAC1Q9H158 963 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 MOCS1Q9NZB8 636 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 MYBPHLA2RUH7 354 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 B3GALT2O43825 422 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 PPP1R11O60927 126 aaPredicted RBP13.49□□□□□ -0.25
COL4A1-201ENST00000375820 NFATC1O95644 943 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 LINGO3P0C6S8 592 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 SELPP16109 830 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 GRK5P34947 590 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 CDKN1CP49918 316 aaPredicted RBP13.49□□□□□ -0.25
COL4A1-201ENST00000375820 OC90Q02509 493 aaPredicted RBP13.49□□□□□ -0.25
COL4A1-201ENST00000375820 ILF3Q12906 894 aaKnown RBP eCLIP13.49□□□□□ -0.25
COL4A1-201ENST00000375820 PPP1R8Q12972 351 aaKnown RBP13.49□□□□□ -0.25
COL4A1-201ENST00000375820 PUS10Q3MIT2 529 aaKnown RBP13.49□□□□□ -0.25
COL4A1-201ENST00000375820 SLC9A4Q6AI14 798 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 ABHD15Q6UXT9 468 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 PIK3R3Q92569 461 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 CPED1A4D0V7 1026 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 TBX18O95935 607 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 CFIP05156 583 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 ALPIP09923 528 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 ADAM8P78325 824 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 SCGB2B2Q4G0G5 96 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 YTHDF3Q7Z739 585 aaKnown RBP13.49□□□□□ -0.25
COL4A1-201ENST00000375820 FITM2Q8N6M3 262 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 ZNF611Q8N823 705 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 SPPL2BQ8TCT7 592 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 DNAJA4Q8WW22 397 aaPredicted RBP13.49□□□□□ -0.25
COL4A1-201ENST00000375820 SGCDQ92629 289 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 MGME1Q9BQP7 344 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 COQ10BQ9H8M1 238 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 SALL3Q9BXA9 1300 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 DPPA5A6NC42 116 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 GPR25O00155 361 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 LDB2O43679 373 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 AKAP8O43823 692 aaKnown RBP13.49□□□□□ -0.25
COL4A1-201ENST00000375820 PCDHGA12O60330 932 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 GJA1P17302 382 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 S100A1P23297 94 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 CCKBRP32239 447 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 NRG3P56975 720 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 ROR2Q01974 943 aaKnown RBP13.49□□□□□ -0.25
COL4A1-201ENST00000375820 TYSND1Q2T9J0 566 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 RIC1Q4ADV7 1423 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 XKR4Q5GH76 650 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 LCLAT1Q6UWP7 414 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 HFE2Q6ZVN8 426 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 C1orf127Q8N9H9 656 aa13.49□□□□□ -0.25
COL4A1-201ENST00000375820 LRRC10BA6NIK2 292 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 CYP3A5P20815 502 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 CBLP22681 906 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 ECT2LQ008S8 904 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 ZNF598Q86UK7 904 aaKnown RBP13.48□□□□□ -0.25
COL4A1-201ENST00000375820 C8orf48Q96LL4 319 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 NODALQ96S42 347 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 EBF3Q9H4W6 596 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 HCN3Q9P1Z3 774 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 SMIM35A0A1B0GVV1 85 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 TM7SF2O76062 418 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 PRNPP04156 253 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 LAG3P18627 525 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 PRR5P85299 388 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 CREB5Q02930 508 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 RIN1Q13671 783 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 ADGRE1Q14246 886 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 TBC1D25Q3MII6 688 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 ABCA11PQ4W5N1 156 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 C1orf94Q6P1W5 598 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 CRELD2Q6UXH1 353 aaPredicted RBP13.48□□□□□ -0.25
COL4A1-201ENST00000375820 CCDC36Q8IYA8 594 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 DPYSL5Q9BPU6 564 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 LHX5Q9H2C1 402 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 WASF2Q9Y6W5 498 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 FABP12A6NFH5 140 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 OAZ2O95190 189 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 CSKP41240 450 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 SLC1A2P43004 574 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 KCNJ5P48544 419 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 MMP14P50281 582 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 BTN3A2P78410 334 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 SLC9B1Q4ZJI4 515 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 KLHL26Q53HC5 615 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 MPP5Q8N3R9 675 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 HMGB4Q8WW32 186 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 TRIM43Q96BQ3 446 aaPredicted RBP13.48□□□□□ -0.25
COL4A1-201ENST00000375820 PPP1R14BQ96C90 147 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 DAPL1A0PJW8 107 aa13.48□□□□□ -0.25
COL4A1-201ENST00000375820 HYKKA2RU49 373 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms