RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 PRKACGP22612 351 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 CHRNB3Q05901 458 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 SLC14A2Q15849 920 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 C10orf120Q5SQS8 335 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 ZNF691Q5VV52 312 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 SLX4IPQ5VYV7 408 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 RAP1GAP2Q684P5 730 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 LDB1Q86U70 411 aaPredicted RBP12.69□□□□□ -0.38
MSH5-204ENST00000375755 DCP2Q8IU60 420 aaKnown RBP12.69□□□□□ -0.38
MSH5-204ENST00000375755 OR52K2Q8NGK3 314 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 FRS2Q8WU20 508 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 AUTS2Q8WXX7 1259 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 ISG20Q96AZ6 181 aaKnown RBP12.69□□□□□ -0.38
MSH5-204ENST00000375755 LRRC3Q9BY71 257 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 ITM2CQ9NQX7 267 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 POLR3BQ9NW08 1133 aaPredicted RBP12.69□□□□□ -0.38
MSH5-204ENST00000375755 MAGEL2Q9UJ55 1249 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 LEF1Q9UJU2 399 aaPredicted RBP12.69□□□□□ -0.38
MSH5-204ENST00000375755 PCDHGA10Q9Y5H3 936 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 RAD51BO15315 384 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 PSMD3O43242 534 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 CACNG3O60359 315 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 PSMB9P28065 219 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 IL12AP29459 219 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 MASP1P48740 699 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 KCNQ1P51787 676 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 CLCN5P51795 746 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 TBX4P57082 545 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 CDK5R2Q13319 367 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 MS4A13Q5J8X5 152 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 SPESP1Q6UW49 350 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 CCDC81Q6ZN84 652 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 MCFD2Q8NI22 146 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 TSPEARQ8WU66 669 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 SLC39A13Q96H72 371 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 FUBP3Q96I24 572 aaKnown RBP eCLIP12.69□□□□□ -0.38
MSH5-204ENST00000375755 CYP2S1Q96SQ9 504 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 DKK3Q9UBP4 350 aa12.69□□□□□ -0.38
MSH5-204ENST00000375755 J3KR12 359 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 PMPCBO75439 489 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 CYBBP04839 570 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 ANXA6P08133 673 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 HAPLN1P10915 354 aaPredicted RBP12.68□□□□□ -0.38
MSH5-204ENST00000375755 PAMP19021 973 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 OR1D2P34982 312 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 MTPNP58546 118 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 GPR17Q13304 367 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 ENPP6Q6UWR7 440 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 RYBPQ8N488 228 aaPredicted RBP12.68□□□□□ -0.38
MSH5-204ENST00000375755 SVOPQ8N4V2 548 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 FBXO22Q8NEZ5 403 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 LGALS12Q96DT0 336 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 TSPAN17Q96FV3 270 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 KLHL5Q96PQ7 755 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 CDK5RAP1Q96SZ6 601 aaKnown RBP12.68□□□□□ -0.38
MSH5-204ENST00000375755 TTPALQ9BTX7 342 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 AIG1Q9NVV5 245 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 OSGIN1Q9UJX0 560 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 AAR2Q9Y312 384 aaKnown RBP12.68□□□□□ -0.38
MSH5-204ENST00000375755 CENPBD1B2RD01 187 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 PRMT5O14744 637 aaPredicted RBP12.68□□□□□ -0.38
MSH5-204ENST00000375755 HS6ST1O60243 411 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 SNX2O60749 519 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 CCNKO75909 580 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 WISP3O95389 354 aaPredicted RBP12.68□□□□□ -0.38
MSH5-204ENST00000375755 CCDC159P0C7I6 412 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 GTF2E2P29084 291 aaKnown RBP12.68□□□□□ -0.38
MSH5-204ENST00000375755 FMO3P31513 532 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 MLLT6P55198 1093 aaPredicted RBP12.68□□□□□ -0.38
MSH5-204ENST00000375755 MAXP61244 160 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 NFKB2Q00653 900 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 IHHQ14623 411 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 NPTX1Q15818 432 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 BRMS1LQ5PSV4 323 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 SPATC1Q76KD6 591 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 PRSS48Q7RTY5 328 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 TMEM179BQ7Z7N9 219 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 CFAP52Q8N1V2 620 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 ATPAF2Q8N5M1 289 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 PPM1MQ96MI6 270 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 RHNO1Q9BSD3 238 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 CWH43Q9H720 699 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 N6AMT1Q9Y5N5 214 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 ACTL7AQ9Y615 435 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 CHD9Q3L8U1 2897 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 PDE4DIPQ5VU43 2346 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 EYSQ5T1H1 3165 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 SLC12A8A0AV02 714 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 TYW5A2RUC4 315 aaKnown RBP12.68□□□□□ -0.38
MSH5-204ENST00000375755 FAM172BPA6NC97 362 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 SCO2O43819 266 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 SLC22A3O75751 556 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 GOT2P00505 430 aaKnown RBP12.68□□□□□ -0.38
MSH5-204ENST00000375755 CST1P01037 141 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 HLA-DQB2P05538 268 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 TRPC1P48995 793 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 POLR2JP52435 117 aaKnown RBP12.68□□□□□ -0.38
MSH5-204ENST00000375755 EPS8Q12929 822 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 CLCA4Q14CN2 919 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 PFKFB4Q16877 469 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms