RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 CAPNS1P04632 268 aa15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 OR56A5P0C7T3 313 aa15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 MYOGP15173 224 aa15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 HTRA4P83105 476 aaPredicted RBP15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 INPP5AQ14642 412 aa15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 COQ5Q5HYK3 327 aa15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 LCN8Q6JVE9 175 aa15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 EPHX4Q8IUS5 362 aa15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 P2RY13Q9BPV8 354 aa15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 CPEB1Q9BZB8 566 aaKnown RBP15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 PCDH12Q9NPG4 1184 aa15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 ERVW-1Q9UQF0 538 aa15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 MANBAO00462 879 aa15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 TLL1O43897 1013 aa15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 WDR47O94967 919 aa15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 ARHGEF15O94989 841 aa15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 ATP1B2P14415 290 aaPredicted RBP15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 POLR2EP19388 210 aaKnown RBP15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 HRH2P25021 359 aa15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 AOAHP28039 575 aa15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 BNIP2Q12982 314 aa15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 SPANXN4Q5MJ08 99 aa15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 ZUFSPQ96AP4 578 aa15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 RIOK2Q9BVS4 552 aaKnown RBP15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 VAPAQ9P0L0 249 aa15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 SLC22A14Q9Y267 594 aa15.63■□□□□ 0.09
CNKSR1-202ENST00000374253 CLGNO14967 610 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 RGS14O43566 566 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 PDYNP01213 254 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 CEBPBP17676 345 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 IL10P22301 178 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 VARSP26640 1264 aaKnown RBP15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 GRIK2Q13002 908 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 PTCHD3Q3KNS1 767 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 GTDC1Q4AE62 458 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 THEMIS2Q5TEJ8 643 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 ELMO1Q92556 727 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 GFM2Q969S9 779 aaKnown RBP15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 ZFYVE19Q96K21 471 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 ZNF641Q96N77 438 aaPredicted RBP15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 TRIM15Q9C019 465 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 IKZF5Q9H5V7 419 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 ARMC1Q9NVT9 282 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 OAZ3Q9UMX2 235 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 PPIL1Q9Y3C6 166 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 HELZP42694 1942 aaKnown RBP15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 AQP12BA6NM10 295 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 FADS2P1A8MWK0 482 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 SH3BGRLO75368 114 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 FOXM1Q08050 763 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 ZNF77Q15935 545 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 PYCR3Q53H96 274 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 ARHGAP15Q53QZ3 475 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 NEK5Q6P3R8 708 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 ELMSAN1Q6PJG2 1045 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 HID1Q8IV36 788 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 AQP12AQ8IXF9 295 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 DUS3LQ96G46 650 aaKnown RBP15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 ZNF597Q96LX8 424 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 PPP3R2Q96LZ3 170 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 UHRF1Q96T88 793 aaPredicted RBP15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 CCT7Q99832 543 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 ACPTQ9BZG2 426 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 GRIP2Q9C0E4 1043 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 FAM83DQ9H4H8 585 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 LRTM1Q9HBL6 345 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 ZDHHC4Q9NPG8 344 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 DLGAP4Q9Y2H0 992 aa15.62■□□□□ 0.09
CNKSR1-202ENST00000374253 LRATO95237 230 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 CLIC3O95833 236 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 GNAO1P09471 354 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 FAM58BPP0C7Q3 252 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 PCNAP12004 261 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 GNPDA1P46926 289 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 ABRQ12979 859 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 GRIN2CQ14957 1233 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 ANKRD46Q86W74 232 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 C12orf40Q86WS4 652 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 C12orf76Q8N812 135 aaPredicted RBP15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 SPPL3Q8TCT6 385 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 TSPEARQ8WU66 669 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 MRGPRX3Q96LB0 322 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 CGREF1Q99674 301 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 HEPHQ9BQS7 1158 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 TBCDQ9BTW9 1192 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 WRAP53Q9BUR4 548 aaKnown RBP15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 DPY30Q9C005 99 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 PKD2L2Q9NZM6 624 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 EIF3LQ9Y262 564 aaKnown RBP15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 A0A1W2PQ67 120 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 TCRBV5S2A0A599 114 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 PRAMEF4O60810 478 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 CLDN9O95484 217 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 PBLDP30039 288 aaPredicted RBP15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 BMPR1AP36894 532 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 PREPP48147 710 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 PRAMEF9Q5VWM5 478 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 NECAB2Q7Z6G3 386 aa15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 CHERPQ8IWX8 916 aaKnown RBP15.61■□□□□ 0.09
CNKSR1-202ENST00000374253 ITFG1Q8TB96 612 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms