RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 GFYI3L273 518 aa17.49■□□□□ 0.39
CTSA-204ENST00000372484 WDR47O94967 919 aa17.49■□□□□ 0.39
CTSA-204ENST00000372484 CLDN9O95484 217 aa17.49■□□□□ 0.39
CTSA-204ENST00000372484 PRNPP04156 253 aa17.49■□□□□ 0.39
CTSA-204ENST00000372484 CYP2A7P20853 494 aa17.49■□□□□ 0.39
CTSA-204ENST00000372484 HNMTP50135 292 aa17.49■□□□□ 0.39
CTSA-204ENST00000372484 ERVK-21P61565 698 aa17.49■□□□□ 0.39
CTSA-204ENST00000372484 RPL38P63173 70 aaKnown RBP17.49■□□□□ 0.39
CTSA-204ENST00000372484 MRPS35P82673 323 aaKnown RBP17.49■□□□□ 0.39
CTSA-204ENST00000372484 SP140Q13342 867 aa17.49■□□□□ 0.39
CTSA-204ENST00000372484 LDLRAP1Q5SW96 308 aa17.49■□□□□ 0.39
CTSA-204ENST00000372484 ZFAND4Q86XD8 727 aa17.49■□□□□ 0.39
CTSA-204ENST00000372484 DNAJB14Q8TBM8 379 aa17.49■□□□□ 0.39
CTSA-204ENST00000372484 FGF13Q92913 245 aa17.49■□□□□ 0.39
CTSA-204ENST00000372484 PKP2Q99959 881 aa17.49■□□□□ 0.39
CTSA-204ENST00000372484 WRAP53Q9BUR4 548 aaKnown RBP17.49■□□□□ 0.39
CTSA-204ENST00000372484 CMTM6Q9NX76 183 aa17.49■□□□□ 0.39
CTSA-204ENST00000372484 DTNAQ9Y4J8 743 aa17.49■□□□□ 0.39
CTSA-204ENST00000372484 AP4S1Q9Y587 144 aa17.49■□□□□ 0.39
CTSA-204ENST00000372484 ATG2AQ2TAZ0 1938 aa17.49■□□□□ 0.39
CTSA-204ENST00000372484 SLC28A1O00337 649 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 QSOX1O00391 747 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 SLC16A5O15375 505 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 HLA-EP13747 358 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 YBX1P67809 324 aaKnown RBP17.48■□□□□ 0.39
CTSA-204ENST00000372484 IMPG1Q17R60 797 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 RNF165Q6ZSG1 346 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 LRRC70Q7Z2Q7 622 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 RAVER1Q8IY67 606 aaKnown RBP17.48■□□□□ 0.39
CTSA-204ENST00000372484 ICA1LQ8NDH6 482 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 MCOLN3Q8TDD5 553 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 GLYATL1Q969I3 302 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 VPS35Q96QK1 796 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 P2RY13Q9BPV8 354 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 TRIM8Q9BZR9 551 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 SFXN1Q9H9B4 322 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 ZNHIT2Q9UHR6 403 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 TCRBV3S1A0A5B6 114 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 MANBAO00462 879 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 WNT9AO14904 365 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 RNASEH2AO75792 299 aaKnown RBP17.48■□□□□ 0.39
CTSA-204ENST00000372484 HSD17B1P14061 328 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 EPORP19235 508 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 FSHRP23945 695 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 METAP1P53582 386 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 HMGCS1Q01581 520 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 TLR1Q15399 786 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 CPSF6Q16630 551 aaKnown RBP eCLIP17.48■□□□□ 0.39
CTSA-204ENST00000372484 DUSP6Q16828 381 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 ZXDCQ2QGD7 858 aaPredicted RBP17.48■□□□□ 0.39
CTSA-204ENST00000372484 PTCHD3Q3KNS1 767 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 NEK10Q6ZWH5 1172 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 TRIM46Q7Z4K8 759 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 PYCR2Q96C36 320 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 SLC29A3Q9BZD2 475 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 ACTL8Q9H568 366 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 PCDHA9Q9Y5H5 950 aa17.48■□□□□ 0.39
CTSA-204ENST00000372484 ZFC3H1O60293 1989 aaKnown RBP17.47■□□□□ 0.39
CTSA-204ENST00000372484 DYTNA2CJ06 578 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 TMEM202A6NGA9 273 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 HEPACAM2A8MVW5 462 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 SLCO2B1O94956 709 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 AP1S2P56377 157 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 MAD2L1Q13257 205 aaPredicted RBP17.47■□□□□ 0.39
CTSA-204ENST00000372484 GAB4Q2WGN9 574 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 HNRNPA1L2Q32P51 320 aaKnown RBP17.47■□□□□ 0.39
CTSA-204ENST00000372484 GET4Q7L5D6 327 aaPredicted RBP17.47■□□□□ 0.39
CTSA-204ENST00000372484 HOMEZQ8IX15 550 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 RASGEF1AQ8N9B8 481 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 USP7Q93009 1102 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 MTFMTQ96DP5 389 aaKnown RBP17.47■□□□□ 0.39
CTSA-204ENST00000372484 SLAMF8Q9P0V8 285 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 EIF3LQ9Y262 564 aaKnown RBP17.47■□□□□ 0.39
CTSA-204ENST00000372484 LRRK1Q38SD2 2015 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 EDDM13A0A1B0GTR0 161 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 KRT87PA6NCN2 255 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 PSMD11O00231 422 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 INPP4BO15327 924 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 TSPAN6O43657 245 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 KRT6AP02538 564 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 KRT6BP04259 564 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 GRIA3P42263 894 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 GNPDA1P46926 289 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 KRT6CP48668 564 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 BNIP2Q12982 314 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 SYTL3Q4VX76 610 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 RABL3Q5HYI8 236 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 C9orf64Q5T6V5 341 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 FBXL19Q6PCT2 694 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 NRSN1Q8IZ57 195 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 RGL4Q8IZJ4 473 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 CATSPER1Q8NEC5 780 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 VN1R2Q8NFZ6 395 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 OR2T34Q8NGX1 318 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 OR2T3Q8NH03 318 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 PIP4K2CQ8TBX8 421 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 OR8D1Q8WZ84 308 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 TMEM125Q96AQ2 219 aa17.47■□□□□ 0.39
CTSA-204ENST00000372484 NR1H4Q96RI1 486 aaPredicted RBP17.47■□□□□ 0.39
CTSA-204ENST00000372484 EGFL7Q9UHF1 273 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms