RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 GCN1Q92616 2671 aaKnown RBP10.22□□□□□ -0.77
COL5A1-202ENST00000371820 ASXL3Q9C0F0 2248 aa10.22□□□□□ -0.77
COL5A1-202ENST00000371820 LRRK1Q38SD2 2015 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 TTC24A2A3L6 582 aaPredicted RBP10.21□□□□□ -0.77
COL5A1-202ENST00000371820 EME2A4GXA9 379 aaPredicted RBP10.21□□□□□ -0.77
COL5A1-202ENST00000371820 TRPC5OSA6NMA1 111 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 EIF4E1BA6NMX2 242 aaKnown RBP10.21□□□□□ -0.77
COL5A1-202ENST00000371820 A8MX80 341 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 CLGNO14967 610 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 YY2O15391 372 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 RRP8O43159 456 aaKnown RBP10.21□□□□□ -0.77
COL5A1-202ENST00000371820 BRINP1O60477 761 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 SMIM24O75264 130 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 MT-CO3P00414 261 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 MYCLP1P12525 358 aaPredicted RBP10.21□□□□□ -0.77
COL5A1-202ENST00000371820 TRIM23P36406 574 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 HSPA13P48723 471 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 IDH3AP50213 366 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 SESN2P58004 480 aaPredicted RBP10.21□□□□□ -0.77
COL5A1-202ENST00000371820 DSC2Q02487 901 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 MED21Q13503 144 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 C1orf61Q13536 156 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 MAPRE2Q15555 327 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 ADRM1Q16186 407 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 ANKRD20A4Q4UJ75 823 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 PNCKQ6P2M8 343 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 EPGNQ6UW88 154 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 LRRC69Q6ZNQ3 347 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 RIPOR1Q6ZS17 1223 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 EFL1Q7Z2Z2 1120 aaKnown RBP10.21□□□□□ -0.77
COL5A1-202ENST00000371820 RD3Q7Z3Z2 195 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 ST13P4Q8IZP2 240 aaPredicted RBP10.21□□□□□ -0.77
COL5A1-202ENST00000371820 FBXW8Q8N3Y1 598 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 CALML6Q8TD86 181 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 PIH1D2Q8WWB5 315 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 DLG3Q92796 817 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 TSACCQ96A04 125 aaPredicted RBP10.21□□□□□ -0.77
COL5A1-202ENST00000371820 FUBP1Q96AE4 644 aaKnown RBP10.21□□□□□ -0.77
COL5A1-202ENST00000371820 CNDP1Q96KN2 507 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 SH3GL3Q99963 347 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 ECSITQ9BQ95 431 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 CENPKQ9BS16 269 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 BOCQ9BWV1 1114 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 TDRD1Q9BXT4 1180 aaKnown RBP10.21□□□□□ -0.77
COL5A1-202ENST00000371820 ADGRE3Q9BY15 652 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 KLHL4Q9C0H6 718 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 CDH19Q9H159 772 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 NMRAL1Q9HBL8 299 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 VCX3AQ9NNX9 186 aa10.21□□□□□ -0.77
COL5A1-202ENST00000371820 A0A0J9YYE9 177 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 DYTNA2CJ06 578 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 HMX2A2RU54 273 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 CPED1A4D0V7 1026 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 CAPN8A6NHC0 703 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 NPIPB15A6NHN6 443 aaPredicted RBP10.2□□□□□ -0.78
COL5A1-202ENST00000371820 FZD6O60353 706 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 KRT36O76013 467 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 TRBC1P01850 177 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 ALDOAP04075 364 aaKnown RBP10.2□□□□□ -0.78
COL5A1-202ENST00000371820 HLA-DQB2P05538 268 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 KITP10721 976 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 PIM1P11309 404 aaPredicted RBP10.2□□□□□ -0.78
COL5A1-202ENST00000371820 CTPS1P17812 591 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 GEMP55040 296 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 NAA20P61599 178 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 BTKQ06187 659 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 DPTQ07507 201 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 MPP3Q13368 585 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 BMPR2Q13873 1038 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 SLC14A2Q15849 920 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 CDKN3Q16667 212 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 TBC1D25Q3MII6 688 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 HSP90AA5PQ58FG0 334 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 PCID2Q5JVF3 399 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 LIPMQ5VYY2 423 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 RAET1GQ6H3X3 334 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 TRMT10BQ6PF06 316 aaKnown RBP10.2□□□□□ -0.78
COL5A1-202ENST00000371820 ZNF765Q7L2R6 523 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 STRA8Q7Z7C7 330 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 NLRP8Q86W28 1048 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 HEATR4Q86WZ0 1026 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 KLHDC8BQ8IXV7 354 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 NRSN1Q8IZ57 195 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 ZNF567Q8N184 647 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 CPSF7Q8N684 471 aaKnown RBP10.2□□□□□ -0.78
COL5A1-202ENST00000371820 ARL10Q8N8L6 244 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 PLA2G15Q8NCC3 412 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 FGF11Q92914 225 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 NSMCE3Q96MG7 304 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 MECRQ9BV79 373 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 TEX101Q9BY14 249 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 DRC3Q9H069 523 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 CLPBQ9H078 707 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 GBA3Q9H227 469 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 TCEAL2Q9H3H9 227 aaPredicted RBP10.2□□□□□ -0.78
COL5A1-202ENST00000371820 CAAP1Q9H8G2 361 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 EFCAB1Q9HAE3 211 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 PLAC1Q9HBJ0 212 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 EML4Q9HC35 981 aaKnown RBP10.2□□□□□ -0.78
COL5A1-202ENST00000371820 SNX15Q9NRS6 342 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms