RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 ZBTB18Q99592 522 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 TDP1Q9NUW8 608 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 PRR23AA6NEV1 266 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 GNGT2O14610 69 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 LSM1O15116 133 aaKnown RBP11.5□□□□□ -0.57
PDE6C-201ENST00000371447 SCAMP1O15126 338 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 ANXA5P08758 320 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 MYCLP1P12525 358 aaPredicted RBP11.5□□□□□ -0.57
PDE6C-201ENST00000371447 TACR1P25103 407 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 ACOX1Q15067 660 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 TTLL9Q3SXZ7 439 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 CCSMST1Q4G0I0 132 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 PYCR3Q53H96 274 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 CARD16Q5EG05 197 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 TMEM215Q68D42 235 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 ANKRD34AQ69YU3 496 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 TMC8Q8IU68 726 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 GPR156Q8NFN8 814 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 ZNF689Q96CS4 500 aaPredicted RBP11.5□□□□□ -0.57
PDE6C-201ENST00000371447 CD244Q9BZW8 370 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 IKZF5Q9H5V7 419 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 HPS4Q9NQG7 708 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 ZDHHC7Q9NXF8 308 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 RIMKLBQ9ULI2 386 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 PDE10AQ9Y233 779 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 DLGAP4Q9Y2H0 992 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 TNPO3Q9Y5L0 923 aaKnown RBP11.5□□□□□ -0.57
PDE6C-201ENST00000371447 HEMK1Q9Y5R4 338 aaPredicted RBP11.5□□□□□ -0.57
PDE6C-201ENST00000371447 TLL1O43897 1013 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 PENKP01210 267 aaPredicted RBP11.5□□□□□ -0.57
PDE6C-201ENST00000371447 ANGPTL8Q6UXH0 198 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 HTR3DQ70Z44 454 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 SFTPA1Q8IWL2 248 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 CATSPER1Q8NEC5 780 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 BIRC7Q96CA5 298 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 SCRN2Q96FV2 425 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 NSMCE2Q96MF7 247 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 BTBD9Q96Q07 612 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 P2RY13Q9BPV8 354 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 CHID1Q9BWS9 393 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 ACTL8Q9H568 366 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 LRTM1Q9HBL6 345 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 PKD2L2Q9NZM6 624 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 DNMT3BQ9UBC3 853 aaKnown RBP11.5□□□□□ -0.57
PDE6C-201ENST00000371447 EIF3LQ9Y262 564 aaKnown RBP11.5□□□□□ -0.57
PDE6C-201ENST00000371447 SPEGQ15772 3267 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 TCRBV3S1A0A5B6 114 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 BBIP1A8MTZ0 92 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 K7EPI3 171 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 HTRA2O43464 458 aaPredicted RBP11.5□□□□□ -0.57
PDE6C-201ENST00000371447 PDYNP01213 254 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 CTSAP10619 480 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 POLR2EP19388 210 aaKnown RBP11.5□□□□□ -0.57
PDE6C-201ENST00000371447 EEF1B2P24534 225 aaKnown RBP11.5□□□□□ -0.57
PDE6C-201ENST00000371447 NSG1P42857 185 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 PPP3CCP48454 512 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 FAM180BQ6P0A1 224 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 SUSD1Q6UWL2 747 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 METTL25Q8N6Q8 603 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 GPATCH1Q9BRR8 931 aaKnown RBP11.5□□□□□ -0.57
PDE6C-201ENST00000371447 SLC6A13Q9NSD5 602 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 ZNF232Q9UNY5 417 aa11.5□□□□□ -0.57
PDE6C-201ENST00000371447 PLXNA3P51805 1871 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 GRXCR1A8MXD5 290 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 H3BSA7 217 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 SAP18O00422 153 aaKnown RBP11.49□□□□□ -0.57
PDE6C-201ENST00000371447 VPS4BO75351 444 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 C8BP07358 591 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 PRKACGP22612 351 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 WASP42768 502 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 GNPDA1P46926 289 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 SYTL3Q4VX76 610 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 XKR7Q5GH72 579 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 STK32CQ86UX6 486 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 IRF7Q92985 503 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 TRIM15Q9C019 465 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 ZBP1Q9H171 429 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 FAM83DQ9H4H8 585 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 PCDH12Q9NPG4 1184 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 ANAPC2Q9UJX6 822 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 PTBP2Q9UKA9 531 aaKnown RBP11.49□□□□□ -0.57
PDE6C-201ENST00000371447 PCDHA9Q9Y5H5 950 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 FAM234BA2RU67 622 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 H7C0S8 307 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 GRM6O15303 877 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 RGS14O43566 566 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 NOBOXO60393 691 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 CPSF4O95639 269 aaKnown RBP11.49□□□□□ -0.57
PDE6C-201ENST00000371447 POP4O95707 220 aaKnown RBP11.49□□□□□ -0.57
PDE6C-201ENST00000371447 EFEMP2O95967 443 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 ABCB1P08183 1280 aaPredicted RBP11.49□□□□□ -0.57
PDE6C-201ENST00000371447 C1SP09871 688 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 OR56A5P0C7T3 313 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 MSH3P20585 1137 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 NNMTP40261 264 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 TTC33Q6PID6 262 aaPredicted RBP11.49□□□□□ -0.57
PDE6C-201ENST00000371447 GDPD4Q6W3E5 623 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 CCDC149Q6ZUS6 474 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 DTWD1Q8N5C7 304 aa11.49□□□□□ -0.57
PDE6C-201ENST00000371447 MINDY1Q8N5J2 469 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms